| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3679 |
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| Symbol | |
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| ID | 4689258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3914029 |
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| End bp | 3915252 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836697 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_983896 |
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| Protein GI | 121606567 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCA AATTCGCTCT TAAATTCATA GCTGCCTGTG CAATAGCAGC AAGCGCAACA
GCCGGTTTTG CGCAAGAAAT GATCAAGATC GCCAACATTG TCGAGCTGTC CGGCAGCGGC
GCCACCGCCG GCACCAACTT CAAGAACGGC ATCGAGCTGG CGGTCAAGGA AATCAACGCC
TCGGGCGGCA TCCTGGGCAA GCAGATCCAG ACCACGACCA GCGACACCCA GAGCAATCCG
GGCGTGGCCA AGGGCTTGAC CCAAAAAGCC ATCGACAACG ATGTATTCGC CATTTTCGGC
CCGGTGTTCT CCGGCTCCAT CATGGTCAGC ATGGCCGAGT CGCGCCGCGC CGAGGTGCCC
AACTTCACCG GCGGCGAGGC GGCAGCCATC ACCGAGCAGG GCAACCCGTA TGTGTTTCGC
ACCAGCTTCA CCCAGGCGAC CGCCATGCCC AAGGTGGCGC GCTACATGAG CGACCAGGCC
AAGCTGAAAA CCATCGCTGT CATCTACGTC AACAACGACT TCGGCAAGGG CGGGCTGGAC
ATGCTGAAAA AGGCACTCGA AGACTCGTCA ACGCGCATCA CCACCGCCAT TTCCACCGAT
GCCGGCCAGG TGGATTTTTC GGCCGCAGTG CTCAAGGCCA AGCAGAGCAA CGCCGAGGGC
GTGTTTGTTT ATTCGAATGA AGAGGAGTCG GCCCGCATCC TGCGCGAGCT GCGCAAGCAG
GGCTGGACCA AGCCCATCAT TGGCGAAACC ACGCTGACCG GCCAGAAGGT CATCGAGCTG
GCCGGCGACG CCGCCAACGG CGCGATTGCC CATGTCGGCC TGACCGTCAA TGCCCCGGTG
CCGGCGGTTC GCGCCTTCAG CGCCAAGTTC GAGAAGGAAT ACAGCTACGT GTCGGACCAC
AACGGCATGA AAGGCTATTC GGGCATTTAC TTTTTGAAGG CGGCGATTGA CAAGGTGGGC
AAGCTCGACC GCAAGGCGGT GGCCGATGCG ATGCACCACC TGAAAGTCAA CAGCGACCGC
TACCCCGGCG CGCTGATGTA CACCGAATTC GACGGCAAGG GCGATCTGGA CCGCATGAGC
TTCATGGTCG AGGTGAAAAA AGGCAAGCAG GAAGTGATTG CCTTCGTGCC CCCGCTGGGC
TTGCGCCGCA AGCCGGTGGC CGTTGCCGCA GCGCCTGCGC CTGCTCCTGA CATCGCGGCG
GCGGCGCAGC CGAAGAAAAA ATAG
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| Protein sequence | MHSKFALKFI AACAIAASAT AGFAQEMIKI ANIVELSGSG ATAGTNFKNG IELAVKEINA
SGGILGKQIQ TTTSDTQSNP GVAKGLTQKA IDNDVFAIFG PVFSGSIMVS MAESRRAEVP
NFTGGEAAAI TEQGNPYVFR TSFTQATAMP KVARYMSDQA KLKTIAVIYV NNDFGKGGLD
MLKKALEDSS TRITTAISTD AGQVDFSAAV LKAKQSNAEG VFVYSNEEES ARILRELRKQ
GWTKPIIGET TLTGQKVIEL AGDAANGAIA HVGLTVNAPV PAVRAFSAKF EKEYSYVSDH
NGMKGYSGIY FLKAAIDKVG KLDRKAVADA MHHLKVNSDR YPGALMYTEF DGKGDLDRMS
FMVEVKKGKQ EVIAFVPPLG LRRKPVAVAA APAPAPDIAA AAQPKKK
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