Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3674 |
Symbol | |
ID | 4690217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3906234 |
End bp | 3906908 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639836692 |
Product | hypothetical protein |
Protein accession | YP_983891 |
Protein GI | 121606562 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.356095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTTT CACTTTCAGC GCTGCATCCG CCAACGCGCG CTCATCAATG GCTGTCGCGC TCGGTCGCGG GACTGCTGTG GGCCGTGGCC GCCGCCAGCA CGGCCTACTG GGGGTCGCGC ATCGCCAGCG CGGGCGCCAC GGTCGCCGTC CATCAAGCGC CCAGGCAGGC ACTGGACACC CAGGCCCCCG CGCATCAGGC GGCGCTGGCC CGTGCGCTTG GCGCATCGCC CCCTGCGGCC GGTGCGCCCG AAGCCGGGGC CGCACAGCGA TTTGCCCTGC TGGGGGTGAT TGCCAGCGGG ACAGGCCAGG GGGCCGCGCT GATTTCGGTC GATGGCGAGC CGGCCCAGCC CCTGGCCGTG GGCGCGCGGA TCGCGTCCGC TTATGTGCTG CAGGCGGTGG GCCGGCGTGA CGCCGTGCTG CTGGACAGCG CAGCGCAGCC GGCGCGGATC AGGCTGACGC TTCCCGATCC GGACGCGGCC CCTGCCGATG CGCAGCCGGC GGCAACCGCA GTTCGTGCTC CTGCACAGAC CGCCGACGCC GTGGCCGCAG CGCCTGCCGA GCCTGCGGCG GTCACTGCGG TGGACGGGCC TCCCGTAGCG CCTGCCCCAC CGCCCCGGCC CAGCACGGAG CCAGCGGCGC GGCAGGATGC AAGATACGCG TCCCCGGGGC GCTAG
|
Protein sequence | MTLSLSALHP PTRAHQWLSR SVAGLLWAVA AASTAYWGSR IASAGATVAV HQAPRQALDT QAPAHQAALA RALGASPPAA GAPEAGAAQR FALLGVIASG TGQGAALISV DGEPAQPLAV GARIASAYVL QAVGRRDAVL LDSAAQPARI RLTLPDPDAA PADAQPAATA VRAPAQTADA VAAAPAEPAA VTAVDGPPVA PAPPPRPSTE PAARQDARYA SPGR
|
| |