Gene Pnap_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3664 
Symbol 
ID4686933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3898276 
End bp3899421 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID639836682 
Productcarboxylate-amine ligase 
Protein accessionYP_983881 
Protein GI121606552 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02050] uncharacterized enzyme 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTG AACCCTTCCA GAAGTCAAGC GCCCTGTCCC TGGGCGTCGA GCTTGAAATG 
CAGCTCGTGA ACACCCACGA CTACGACCTG GCGCCCTACG CCGAGGACAT GCTGCGGCTG
ATGAGCAAGA TTGCGCTGCC CGGCGCGGTG GTGCCCGAGA TGACGTCGAG CATGATCGAG
GTCTCGACCG GCATCTGCCA CTCGTCCGCC GAGGTGCTGG GCCAGCTGAC GCAGATCCGC
GATGCGCTGG TCAAAAGCGC CGACAAGCTC AACATCGCGG TGGTCGGCGG CGGCACCCAT
CCGTTCCAGC AGTGGCACGA GCGCCGCATC TACGACAAGC CGCGCTTTCG CGAACTGTCC
GAGCTGTACG GCTACCTGTC CAAGCAGTTC ACCATCTTCG GCCAGCATGT GCACATCGGC
TGCCCCGACG CCGACACCGC GCTGCTCACG CTGCACCGCA TGTCGCGCTA CATTCCGCAT
TTCATCGCCT TGTCGGCTTC CAGCCCGTAT GTTCAGGGCC AGGACACGGC CTTCGACTCG
GCGCGGCTGA ACTCGGTGTT TGCCTTTCCG CTGTCGGGCC GCGCGCCGTT CGCGCTGACC
TGGGACGAGT TCACGGTGTA CTTCAACAAG ATGGCGCACA CCGGCGTGGT CAAGAGCATG
AAGGATTTCT ACTGGGACAT CCGGCCCAAG CCGGAGTTCG GCACGATTGA AATCCGCGTC
TTCGACACGC CGCTGACCAT CGAGCGCGCC ACCGCGCTGG CCGGCTATGT GCAGTCGCTG
GGTTCGTGGT TCATGAACGA CCAGCCCTTC ATGCCGACCG AGGACGACTA CCTGGTCTAT
ACCTACAACC GTTTCCAGGC CTGCCGTTTT GGCCTGGACG CGGTGTATGT CGATCCGGCC
ACCGGCGGCC ACATGCCGCT GCGCGAACAC ATCCTGATGA CCATGGCGCA GATCGAGCGC
CATGCGCACC GGCTGGACGC CAGCGCCTCC ATCCACCTGC TGCGCACCAG CGTCGAGCGC
AACGACAACG ACGCCCGCTG GCTGCGCGAG CGCCAGGGCG AGGAACGCCT GCTGGCCGAA
GTCATCCGCC AGGCAGCGGA CCGCTTCCGG GGTGGCGTGG ACCATGAGCC GGGTGGATTT
TCGTAG
 
Protein sequence
MSLEPFQKSS ALSLGVELEM QLVNTHDYDL APYAEDMLRL MSKIALPGAV VPEMTSSMIE 
VSTGICHSSA EVLGQLTQIR DALVKSADKL NIAVVGGGTH PFQQWHERRI YDKPRFRELS
ELYGYLSKQF TIFGQHVHIG CPDADTALLT LHRMSRYIPH FIALSASSPY VQGQDTAFDS
ARLNSVFAFP LSGRAPFALT WDEFTVYFNK MAHTGVVKSM KDFYWDIRPK PEFGTIEIRV
FDTPLTIERA TALAGYVQSL GSWFMNDQPF MPTEDDYLVY TYNRFQACRF GLDAVYVDPA
TGGHMPLREH ILMTMAQIER HAHRLDASAS IHLLRTSVER NDNDARWLRE RQGEERLLAE
VIRQAADRFR GGVDHEPGGF S