| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3662 |
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| Symbol | |
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| ID | 4688639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3894860 |
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| End bp | 3896824 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836680 |
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| Product | putative site-specific recombinase transmembrane protein |
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| Protein accession | YP_983879 |
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| Protein GI | 121606550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TGACCCAGTT GCTCAGGGCG CTGGACCCGG GCGCCGAGCT GGCCGACCGC
CATGTCTGGC TGATCAAGCT GTTTGAATGG ATTCGCGGCG ACAAGGCCTC GGTTCAGGCC
GCCGTGGCGC GGGTGCAGGC CTTCATCGAG GCCGTGCAAA AGCAGCCCGA GCTTCAGGCG
CGCCTGCAGG CCTGGTGGGA AACACTGATC CAGACGGTTG ACATCACCCC CTTGCTGGCT
GATTTCGGCT TTGCGCCGCG CACCGCCTTT GTCAGCGAAC TGGCCGAGCG CCTGCGCCGC
AAGCTGCTGC CCGGCACGCC TGAAACGCGC GACGCCTCGG AGCTGTTCCC GCTGGTGGTG
CCGACGCGTT TCGATGCCCA GTGGATCAGT GCGCTGGAAG AAACCCAGAT GGCGCAGCTC
ACGGTGCTGC TGTCGGCCAA CCCGGCGCGC GACACCCGGC GCTGGCACTA CAGCCTGATG
GACGCCATCA CCTACTGCAC GGCGCAAATC CGCGCCACCG GTTTTGCGCC GGAACTGCGG
CTGCGCATGA ACCGGGCCAG CCCGCATGCA CGCTCGTTTC ATGCCCTGCC CGCCGATGTG
CAGGAACTGC GCACGGTCTT TTTCCAGCCT AGGCGCGACG ATGCGGCGCT GCAGGCGGCC
GTCAGGCAGT ACCGTGAGCG GCTCGATGCC TGCCGCCAGG CAGTCAACAG CATTTATGCC
CATCTGGAGG AAAACGGCAT TTCCGTCGGC ATGGTGTTCC GGCTGCGCCA GCTGCGCGCG
CGCATGCTGC GCGACCGCGA ACTGCTCGAT GCCCTGCTGT CGCCCAAACC GGCCATGGCC
GCGCTCAAGC TGCTGGCGCG GCGCGTCGCC ACCGCGCAGG AAAGCAAGAG CATAGGCGCG
CTGATCAGCA CCAATTCGAC CCTGCTGTCG GCCAAGATGG CCGAGCGCAG CGCCGAGACC
GGCGAGCACT ACATCACCCG CAACCGTGCC GAGTACAAGG AAATGCTGGG AAAGGCGATG
GGCGGCGGCG CCGTCACCGC GCTGACGACG CTGCTCAAGT TCATGGTCGT GGGCATCGGC
CTGTCGGCGT TCTGGAGCGG CTTCTGGGCC AGCGTGGCCT ATGCCGGCTC GTTCATTTTG
ATACAGCTGT TGCATTTCAC GCTGGCCACC AAGCAGCCGG CCATGACGGC GCCGGCCATG
GCTGCCAAGC TCAAGGACAT CGACTCCGAC GAATCCGTCA CCACGCTGGA GGACTTCGTC
GATGAAGTCA CGCACCTGGT GCGCTCCCAG GTGGCGGCGG TGTTTGGCAA TGTCTTCATG
GTCGTGCCGG CCGTGCTGCT GGTCAACGCC GTGATCGGGC TGCTGCTGGG CCGGCCGATG
ATCAGCCATG ACAGCGCCCA CCATGTGCTG GAATCGCTGA CGCTGCTCGG CCCGACGCTG
CTGTGGGCGG CCTTTACCGG CGTGGTGCTG TTTGCCTCCA GCATGATTGC CGGCTGGGTC
GAGAACTGGT TCGTGCTGCA CCACCTGGGC TCGGCCATGC GGCACAACCC GCGCTTTACC
GCCGTGCTGG GCAACGAGCG CGCGGCCCGC TGGTCGGCGT TCACGCGCGA ACACATCTCG
GGTTTTGCCT CGAATATCTC GCTCGGTTTC ATGCTCGGCC TGATCCCGGC GTTCACCGGC
TTTTTTGGCC TTGAGCTGGA ATTGCGCCAT GTCACGCTTT CGACCGGGCA ACTGGCGGCC
GCCGGGGCGT CGCTGGGGCT GGAGGCTTTG CGGCAGGCGG CGTTCTGGTG GAGCGTGGCC
TCGATTCCAC TGATCGGCGC GCTCAATCTG GGCGTGAGTT TTTACTTTGC CTTCCGGCTG
GCGCTGCAGG CGCACAACGT CAGCAAGCTC GACCGCGCCC GCATCCGGGC GGCTATTCTG
GCGCGCTGGC GCAGCCATCC GCTGCACTTT TTCATCCCCC GTTAA
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| Protein sequence | MKNLTQLLRA LDPGAELADR HVWLIKLFEW IRGDKASVQA AVARVQAFIE AVQKQPELQA
RLQAWWETLI QTVDITPLLA DFGFAPRTAF VSELAERLRR KLLPGTPETR DASELFPLVV
PTRFDAQWIS ALEETQMAQL TVLLSANPAR DTRRWHYSLM DAITYCTAQI RATGFAPELR
LRMNRASPHA RSFHALPADV QELRTVFFQP RRDDAALQAA VRQYRERLDA CRQAVNSIYA
HLEENGISVG MVFRLRQLRA RMLRDRELLD ALLSPKPAMA ALKLLARRVA TAQESKSIGA
LISTNSTLLS AKMAERSAET GEHYITRNRA EYKEMLGKAM GGGAVTALTT LLKFMVVGIG
LSAFWSGFWA SVAYAGSFIL IQLLHFTLAT KQPAMTAPAM AAKLKDIDSD ESVTTLEDFV
DEVTHLVRSQ VAAVFGNVFM VVPAVLLVNA VIGLLLGRPM ISHDSAHHVL ESLTLLGPTL
LWAAFTGVVL FASSMIAGWV ENWFVLHHLG SAMRHNPRFT AVLGNERAAR WSAFTREHIS
GFASNISLGF MLGLIPAFTG FFGLELELRH VTLSTGQLAA AGASLGLEAL RQAAFWWSVA
SIPLIGALNL GVSFYFAFRL ALQAHNVSKL DRARIRAAIL ARWRSHPLHF FIPR
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