Gene Pnap_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3658 
Symbol 
ID4687910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3892712 
End bp3893251 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID639836676 
Productcytochrome B561 
Protein accessionYP_983875 
Protein GI121606546 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.76446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT CATCTTTCTC TCCCCAGGCC CGGCCCGTCT GGGACCGTTT CGTGCGGGTG 
TTTCACTGGA CGCTGGTGAG CTGCGTGGCA CTGAACTACT TCGTGCTTGG TGACGGCAAG
GCGCTGCACC AGTGGATCGG TTATCTGGCG GCGGGGCTGG TGATGGCGCG CATCGTCTGG
GGCGTCATCG GCTCTCGCTA CGCGCGGTTT TCAAGCTTCT TTCCCACGCC CGCCCGGCTT
GGGCGGCATA TTCGCCAGCT CAAGGCCGGC AAGCCCGAGA TGCACTGGGG GCACAACCCT
TTGGGCGCGC TGATGATTCT GGCCCTGATC AGCCTGGTGC TGGGGCTGGG CGTCACCGGA
TGGATGCAGA CGCTGGACGC CTACTGGGGT GACGAGGTGC TGATGGAAGT CCATGAAGTG
CTGGGCAACG TGCTGATTGG CCTGGCAACG CTGCATGCCC TGGCCGCGAT TGTCATGGGC
CGCCTGGAGC GAACCCGGTT GATCCGGGCG ATGTTCACCG GCGTCAAGGA GCGCTTTTAA
 
Protein sequence
MENSSFSPQA RPVWDRFVRV FHWTLVSCVA LNYFVLGDGK ALHQWIGYLA AGLVMARIVW 
GVIGSRYARF SSFFPTPARL GRHIRQLKAG KPEMHWGHNP LGALMILALI SLVLGLGVTG
WMQTLDAYWG DEVLMEVHEV LGNVLIGLAT LHALAAIVMG RLERTRLIRA MFTGVKERF