| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3656 |
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| Symbol | |
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| ID | 4687824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3891106 |
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| End bp | 3891810 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836674 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_983873 |
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| Protein GI | 121606544 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.755729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACCACG GCCGGTACGA CGCGGCCATC GTCGATCTCG ACGGCACGAT GGTCGATACC
ATGGGCGACT TCGTGGTGGC GCTCAACCTG ATGCTGGCCG AAGTACTGCC CCGGGATATG
GCCGGCGCGG CACTGGATTC CCTCACCGTC AGCCGCATGG TCGGCAAAGG CTCCGAGCAT
CTGGTGAAAT CAGTGCTGAA TCATGTGTTT GCGCAATCAG GACGGGCATG TGCAGCTATT
GATTTGGTAG CGCATTACGA CCGCGCCCAG GCCAGCTACC AGCAGCACTA TGCGGCCATC
AACGGCCAGC ATGCAAGCCT TTACCCCGGC GTGCTGGAGG GGCTGCGCAG CCTGCAAAGC
ACCGGGCTTA GACTCGTCTG CCTGACCAAC AAGCCGCTGG CCTTTGCGCG TTCGCTGCTC
AAGCTCAAGG GCCTGGACGG GTTTTTCTGC GAAGTCTTTG GCGGCGATTC GTTCGAGCGC
AAGAAACCCG ATCCGCTGCC GCTGCGCAAG GCCTGCGAGT TCCTGGGAAC GCTGCCGGCG
CGCACCCTGA TGATTGGCGA CTCCAGCAAC GATGCGCTGG CGGCGCGGGC CGCAGGCTGT
CCGGTGCTGC TGGTGACCTA TGGCTACAAC CATGGCGAGC CGGTGCGCGC GGTGGATGCC
GACGGTTTTG TGGACTCGCT GGCGGAACTG TTCGACCGGC GCTGA
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| Protein sequence | MNHGRYDAAI VDLDGTMVDT MGDFVVALNL MLAEVLPRDM AGAALDSLTV SRMVGKGSEH
LVKSVLNHVF AQSGRACAAI DLVAHYDRAQ ASYQQHYAAI NGQHASLYPG VLEGLRSLQS
TGLRLVCLTN KPLAFARSLL KLKGLDGFFC EVFGGDSFER KKPDPLPLRK ACEFLGTLPA
RTLMIGDSSN DALAARAAGC PVLLVTYGYN HGEPVRAVDA DGFVDSLAEL FDRR
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