Gene Pnap_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3655 
Symbol 
ID4687191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3890486 
End bp3891073 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID639836673 
Productputative lipoprotein transmembrane 
Protein accessionYP_983872 
Protein GI121606543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.753374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTA CAAAGCGCTG CGTGACGACC CTGGCCGGGT TGCTGCTGAC AGTCGGCATT 
CAGGCCGCGC CGGTTGAGAT GGCAGGCGTC AAGCTGGCCG ACCCGATTGA CCTGGGCGAC
GCCAGACTGC AGCTCAATGG CGCCGGCATT CGCTACAAGG CCGTCTTCAA GGTCTATGTA
GCGGCCCTTT ACCTGAACAA AAAGGCGGCG ACTCCGGAGG AGGTTTATGC CACTTCGGGT
CCCAAGCGCA TCAGCATCAC GCTGCTGCGC GAGATCGATT CCAATGAACT CGGCAAGAGC
TTTACCAAGG CGTTCGAGGA AAACGCCCCC AAGACGGAGA TGTCCAGGCT GATTCCGGGC
CTGCTCAAGA TGGGCCAGGT TTTTGCCGAC CAGAAGAAAA TGGTCGCGGG CGAAAACTTC
ACCATCGACT GGGTTCCGGG CACGGGCACG GTGATTTCGG TCAAGGGCAA GCCGCAGGGC
GAGCCGATCA AGGAGGCCGA ATTCTTCAAC GCCATGATGC GCATCTGGCT GGGCAGCAAG
CCGGCGGACT GGAAACTCAA GGACGAGTTG CTGGGCAAGG CGTCCTGA
 
Protein sequence
MTLTKRCVTT LAGLLLTVGI QAAPVEMAGV KLADPIDLGD ARLQLNGAGI RYKAVFKVYV 
AALYLNKKAA TPEEVYATSG PKRISITLLR EIDSNELGKS FTKAFEENAP KTEMSRLIPG
LLKMGQVFAD QKKMVAGENF TIDWVPGTGT VISVKGKPQG EPIKEAEFFN AMMRIWLGSK
PADWKLKDEL LGKAS