Gene Pnap_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3653 
Symbol 
ID4686096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3888231 
End bp3888545 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID639836671 
Productchorismate mutase 
Protein accessionYP_983870 
Protein GI121606541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA TTCACAAGGT CGAACACTGC CACACCATGG CCGATGTGCG CCGCAACATC 
GACGCGCTGG ACGAGCGCAT CGTGGCGCTG ATCGCCGAGC GCAGCGGCTA CGTCGCCCAA
GCCGCGCGCA TCAAGCAAAA TGCCAACCAG GTGCATGACC AGGCGCGCAT CGACTTCATC
GTCGAGCGGG TCAGGGCCAT GGCCACGGAG CAGGGCGCGC CCGAAGCCGT CATCGAGGCC
ACTTACCGCG CCATGATCGA CGCATTCATT GAATTTGAGC GCGGCGAATT CAAGCGCCTG
CACCAGGAGG GCTGA
 
Protein sequence
MTLIHKVEHC HTMADVRRNI DALDERIVAL IAERSGYVAQ AARIKQNANQ VHDQARIDFI 
VERVRAMATE QGAPEAVIEA TYRAMIDAFI EFERGEFKRL HQEG