Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3651 |
Symbol | |
ID | 4687840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3886536 |
End bp | 3887585 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639836669 |
Product | threonine aldolase |
Protein accession | YP_983868 |
Protein GI | 121606539 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCATA AACCAGTCGA TTTGCGCAGC GACACGGTCA CGCAGCCGAC CGCTGCGATG CGCGCGGCCA TGCAGGCAGC ACCGCTGGGC GACGATGTGT TCGGCGACGA CCCGAGCGTC AATGCGCTGC AGGACAAAAT CGCTGCCCTG CTGGGCTTCG AGGCCGCGCT GTTCGTGCCC ACCGGCACGC AGGGCAACCT GTGCGCCATC CTCGGCCATT GCCAGCGCGG CGACGAGTAC ATCGTCGGCC AGCAGGCGCA CTGCTACCGC TGGGAAGGCG GCGGCGCGGC GGTGTTCGGC AGCGTGCAGC CGCAGCCGCT GAACCACCAG CCCGACGGCA CGCTGCTACT TTGCGACATC GAAGCGGCCA TCAAGCCCGA CGACGCGCAT TTCGCCCGCA CGCGGCTGCT GGCGCTGGAA AACACGCTGG GCGGCAAGCT GCTGCCGTTC GAGTATCTGC AGCAGGCGAC GGAACTGGCC GCCGACAAGG GCCTGGGCCG GCATCTGGAT GGCGCGCGGC TGTTCAATGC CGCCGTGGCG CAGGCGGCGC AAACCGGCAG CGATGCGTTC ACGGAGGCGC GCCGCATCGC CCAGTGCTTT GACAGCGTGT CGGTCTGCTT CAGCAAGGGG CTGGGCGCGC CGGTCGGCTC GGCGCTGTGC GGATCGCGCG AATTCATCGC CAGAGCCCAC CGCATCCGCA AGATGGCCGG CGGCGGCATG CGCCAGTCCG GCATGCTGGC GGCGGCAGCG ATGCATGCGC TCGACCACCA TGTCGTGCGG CTGGCGCAGG ACCATGCGTT GGCGCAGCGG CTGGCCGACG GGCTGGCGGG CATCGACGGC CTGCGGGTCG AAGCGCCGCA GACCAACCTC CTGTTCGTCG ATTTGACGGG TGCGGCGCGC GACCAGTCGG GGGCCTTGCT GCAGCATCTG GCTGCGCATG GCGTCCAGGC GACTGGCCTG TACCGCCTGC GGTTTGTCAC GCACCTGGAC GTGGATGCTG CGGACATTGA CCGTGCAGCC GCCGTAGTCC GACAATTCTT CAATGGCTGA
|
Protein sequence | MMHKPVDLRS DTVTQPTAAM RAAMQAAPLG DDVFGDDPSV NALQDKIAAL LGFEAALFVP TGTQGNLCAI LGHCQRGDEY IVGQQAHCYR WEGGGAAVFG SVQPQPLNHQ PDGTLLLCDI EAAIKPDDAH FARTRLLALE NTLGGKLLPF EYLQQATELA ADKGLGRHLD GARLFNAAVA QAAQTGSDAF TEARRIAQCF DSVSVCFSKG LGAPVGSALC GSREFIARAH RIRKMAGGGM RQSGMLAAAA MHALDHHVVR LAQDHALAQR LADGLAGIDG LRVEAPQTNL LFVDLTGAAR DQSGALLQHL AAHGVQATGL YRLRFVTHLD VDAADIDRAA AVVRQFFNG
|
| |