| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3645 |
|---|
| Symbol | |
|---|
| ID | 4687819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3880776 |
|---|
| End bp | 3881372 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639836659 |
|---|
| Product | NusG antitermination factor |
|---|
| Protein accession | YP_983862 |
|---|
| Protein GI | 121606533 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.56368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC TGAACAATAC GGTAGTCAGC GATGCTGTGG CCGATGCCTC CTTGGCGCTG
ACCCCTGGCA TGCAGTGGTA TGTTGTTCAT GCCTATTCCG GCATGGAAAA AGCGGCTGAG
CGTAATATTG TTGAGCGCAT CAACCGTGCT GGCATGCAGT CCAAGTTTGG CCGTTTTCTT
GTGCCTACTG AAGAGGTGGT CGAGATCAAG AATGGCCAGA AAAAGACGAC CGAACGTCGT
TTCTTCCCCG GCTATGTGCT TGTAGAAATG GTCATGGATG ACGAAACCTG GCATTTGGTG
AAGCACACCA ATAAAGTCAC TGGTTTTGTT GGCGGCGCGA AAAACCGTCC AGCCCCAATT
TCTGAAGAAG AAGTGCAAAA GATCGTCAGT CAGATGCAGG TGGGCACCGA CAAGCCGCGC
CACAAGGTCG AGTTTGAAGC GGGTGAATAC GTCCGTGTCA AGGATGGTCC TTTCACTGAC
TTCAACGGTA CGGTTGAAGA AGTGAACTAC GAAAAGAACA AAGTTCGGGT GTCGGTCACG
ATCTTCGGAC GGGCAACACC GGTTGAGCTG GAGTTCAGTC AGATCGAAAA AACCTGA
|
|---|
| Protein sequence | MSDLNNTVVS DAVADASLAL TPGMQWYVVH AYSGMEKAAE RNIVERINRA GMQSKFGRFL
VPTEEVVEIK NGQKKTTERR FFPGYVLVEM VMDDETWHLV KHTNKVTGFV GGAKNRPAPI
SEEEVQKIVS QMQVGTDKPR HKVEFEAGEY VRVKDGPFTD FNGTVEEVNY EKNKVRVSVT
IFGRATPVEL EFSQIEKT
|
|---|
| |