Gene Pnap_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3636 
Symbol 
ID4686305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3867096 
End bp3867572 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID639836650 
Productputative transposase of insertion sequence ISRm10-1 
Protein accessionYP_983853 
Protein GI121606524 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0772273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGA CGCGGGGCCG CTCGCCGCGG GGCCAGCGCT GCCGGGGCTT TGCGCCCGCC 
GGCCACTGGC GCACCACCAC GTTTGTCTGC GCGCTGAGCA CCCAGGGGCT TCGGGCGCCC
CTGGTACTTG ACGGCCCCCT CAACGGGCCT GCCTTTCGCG CCTGGGTCGA GCAGTTTCTC
GTGCCCGAAC TGCGGCCCAG CGACATCGTG GTAATGGACA ACCTCAGCGC CCATAAAGTC
GCCGGCATCC AGGCGGCCAT CGAGCAAGCC GGGGCGACGG TGAAGTACCT GCCGCCCTAC
AGCCCGGACT TCAACCCCAT CGAGCAGGTC TTTGCCAAGC TCAAGGCGAT GCTGCGAAAG
ACCCAGGCCA GAACCGTCGA TGCCTTGTGG AGCGCCATTG GCCAATTGCT CGACCGGTTT
GGCAGCGCCG AGTGCGAGCG CTACGTTCGC CACTGTGGCT ATTGCGGGTC AGGGTGA
 
Protein sequence
MAPTRGRSPR GQRCRGFAPA GHWRTTTFVC ALSTQGLRAP LVLDGPLNGP AFRAWVEQFL 
VPELRPSDIV VMDNLSAHKV AGIQAAIEQA GATVKYLPPY SPDFNPIEQV FAKLKAMLRK
TQARTVDALW SAIGQLLDRF GSAECERYVR HCGYCGSG