Gene Pnap_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3630 
Symbol 
ID4690073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3861164 
End bp3863461 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content65% 
IMG OID639836644 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_983847 
Protein GI121606518 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.153032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCTT CCGTCAAGCT GATTGCCTTG AAAAGCAGCG CGGCTTTTCG ATGGACCGTG 
GGCGTTGGCG CGGGTGTCGT GGTGGCCCTG GGACTGGTGC TGCTGTTCTT GCTGACACAG
GCGACCGGCA ACCGCGAGCT TTACGAACGC AATTACACGC TGCTCCTCGG GCTGAACGTG
GCGGTGGCCG CCTTGCTGGT GCTGGTGATT GGCTGGATTG CGCTGAAGCT TGTACTGCGC
CTGCGCCAAG GGCGCTTTGG CAGCCGCCTG CTGGTCAAGC TGGCGGCCAT CTTCGCGCTG
GTCGGCCTGA TGCCCGGCCT GATGATTTAT GTGGTGTCCT ACCAGTTCGT CTCGCGCTCG
ATTGAAAGCT GGTTCGATGT CGAAGTGGAG GGCGCTTTGG GTGCCGGCCT GAACCTGGGC
CGCGCAACGC TGGACACCCT GGCCAATGAC CTGGCCAACA AGACGCGGCA GGCCGCCACG
CAATTGGCCG AAGTCCCGGA TGCCATGGTC GGCCTGAACC TGGAGCGCCT GCGCGAGCAG
CTGGTGGCCA GCGATGTGGT GCTCTGGAGC GCCTCCGGCC AGTTGATTGC CAACGCCGGC
GAATCCAGGT TTTTAATCCA GCCCGAGCGG CCTTCGGTGC AGCAACTGCG CAGCGCGCGC
ACCCAGCGGG TCACCACGCA GATCGAAGGG CTTGACGAGA TCGTGCCGGG CGGCAATGGT
GAGCTGGGCG CCGACACCCA TGCCACACCG TCGGCACGCG GCGCTGCCAC GGCCGCGCGT
GTCAAGGCCA TTGCCGTGGT GAACAACCCG AACCTGAGCG TGCTGGAGCA GTCCCGTTAT
TTGCAGGTCA CCAGCGTGCT GCCCGCCGGG CTGGTGGCCA ATGCCATTGC CGTGCAGGAG
GCCAACCGCC AGTACCAGGA GCGTGCCCTG GCGCGCGGGG GCTTGCGCAA GATGTACATC
GGCACGCTCA CGCTCAGCCT GTTCCTGGCC GTGTTTGGCG CGGTGTTGCT GGCCGTCGTG
CTGGGCAACC AGTTGGCCAA ACCCCTGCTC CTGCTGGCCG AAGGGGTGAA ACAGGTGGCC
CAGGGCGACC TGACGCCCAA AGCCGCGCTC AAAGGCAAGG ACGAACTGGG CGGGCTGACG
CGCTCGTTCG CCGACATGAC GCAGCAACTG GCCGACGCCC GCTCCGCCGT GCAGCACAGC
ATGAGCCAGG TCGATGCCGC CCGTGCTAAC CTGCAAACCA TCCTCGACAA CCTCACGGCG
GGCGTCATCG TGCTGGACGT CTGGGGGCGC CTGCAGTCGA GCAATCCGGG CGCCAGCCGC
ATCCTGCGCG CGCCGCTGCA GGATTACCAG GGCCAGCCGC TGGGCGAAGT CCCCGGGCTG
GAGGTATTCG CCAAGGACGT GCTCGCCCAG TTTGCCGACT ACCTCAGCAA CAACGCGGCG
CAAACGCTGG CGCACTGGCA GCAGTCGTTT GAACTGCATG CCGCAGGTCA TGGCGCCAGC
GACAACGCCA TCACGCTGAT CGCGCGCGGC GCCAAAATGC CCGGAACCCA GGAGTATTTG
CTGGTCTTCG ACGATATTTC CGACATGGTG TCGGCCCAGC GCGCGCAGGC CTGGGGCGAA
GTGGCGCGCC GGCTGGCGCA TGAAATCAAG AATCCGCTCA CGCCCATCCA GCTGTCGGCC
GAGCGCCTGG AGATGAAGCT GAACGGAAAA CTGGCCCCCG CCGAGCAGGC GCTGCTGACC
AAATCGGTCA AGACCATCGT GGACCAGGTG GATGCCATGA AGCGGCTGGT GAATGAGTTT
CGCGACTATG CGCGCCTGCC TGCCGCCGAG CTGGTCGCGG TGGACCTCAA TGCGCTCATC
AACGACGTGC TGCAGCTCTA CCACAGCGAC TCTGCAAGCC CGCTGGCCCC GGTGGTTGCC
GAACTCGACC CCAAGGCGCC GCCCATCCGG GGCGATGCCC AGTTGCTGCG CCAGGTCATA
CACAATCTTT TGCAAAACGC GCAGGATGCG CAGGAAGGCC GGCAAGAGGC CTGCGTGACC
CTCAAAACCG ACTATTCCGA AAGCTCGCAG CGGGTACGCC TGAGCGTGCG CGACAATGGG
ACGGGCTTTC CCGAGCACAT CCTCAAGCGG GCTTTCGAGC CCTACGTCAC CACCAAGGTC
AAGGGCACCG GCCTGGGGCT GGCGGTGGTC AAGAAAATTG TCGATGAGCA CGGCGCGCGC
ATCGACATTT CAAACCGTGT TACCGATGGG ATCGTGCAGG GCGCGCAAGT GTCGTTATCA
TTTGGCGTTG CGACTTGA
 
Protein sequence
MIPSVKLIAL KSSAAFRWTV GVGAGVVVAL GLVLLFLLTQ ATGNRELYER NYTLLLGLNV 
AVAALLVLVI GWIALKLVLR LRQGRFGSRL LVKLAAIFAL VGLMPGLMIY VVSYQFVSRS
IESWFDVEVE GALGAGLNLG RATLDTLAND LANKTRQAAT QLAEVPDAMV GLNLERLREQ
LVASDVVLWS ASGQLIANAG ESRFLIQPER PSVQQLRSAR TQRVTTQIEG LDEIVPGGNG
ELGADTHATP SARGAATAAR VKAIAVVNNP NLSVLEQSRY LQVTSVLPAG LVANAIAVQE
ANRQYQERAL ARGGLRKMYI GTLTLSLFLA VFGAVLLAVV LGNQLAKPLL LLAEGVKQVA
QGDLTPKAAL KGKDELGGLT RSFADMTQQL ADARSAVQHS MSQVDAARAN LQTILDNLTA
GVIVLDVWGR LQSSNPGASR ILRAPLQDYQ GQPLGEVPGL EVFAKDVLAQ FADYLSNNAA
QTLAHWQQSF ELHAAGHGAS DNAITLIARG AKMPGTQEYL LVFDDISDMV SAQRAQAWGE
VARRLAHEIK NPLTPIQLSA ERLEMKLNGK LAPAEQALLT KSVKTIVDQV DAMKRLVNEF
RDYARLPAAE LVAVDLNALI NDVLQLYHSD SASPLAPVVA ELDPKAPPIR GDAQLLRQVI
HNLLQNAQDA QEGRQEACVT LKTDYSESSQ RVRLSVRDNG TGFPEHILKR AFEPYVTTKV
KGTGLGLAVV KKIVDEHGAR IDISNRVTDG IVQGAQVSLS FGVAT