| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3621 |
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| Symbol | |
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| ID | 4689680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3852802 |
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| End bp | 3854430 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836634 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_983838 |
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| Protein GI | 121606509 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.29536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCT CCATCACGGC CCCATGCGCG CAGACCGACC GCTTCGTGCA CGAGCACCTG
CCGCCGCCCG ACCAGTGGCC CCGGCGCGTG TACCCGCCCG GCACCGACAT CCCGGAACAG
GCCAACCTGG TCAATGCGCT GTTCACGCGG GCGATTCAAA ACGGCCATGC CGACCGGCCG
CTGCTGCGTT CGGACCGGAT CACGCTGAGC TATGCCGATG CCTTGGAGCG CGTCAACCGC
ATCGCCCAGG TGCTGACCGA AGATTTCCAC CTGGTGCCGG GCAACCGCGT GCTGCTGCGC
GGCGGCAATT CGATTGGCAT GGCGCTGGCC TGGCTGGGCG TGGTCCAGGC CGGGCTGGTG
GCCGTGGCAA CCATGCCGCT GCTGCGCGCC AAGGAGCTGG TAGAGATCAT TGACAAGGCC
AGGCCGGCGC TGGCGCTGTG CGACGGCGCG CTGCTCGAAG AACTGCAGAT CGCCCAGGCG
CAAACCGGCG CGTTGCAAAC CGTCATCCCC TTCAACCTGA TGGACGCGCC CGGCTCAATG
GCGGCGCTGG CGGCGCGAAA GGACGGGCGT TTCACACCCT GCCCGGTCGC GGCCGACGAC
ATCGCCCTGA TGGCCTTCAC CTCGGGCACC ACCGGCAAAC CCAAGGCGGC GGTTCACAGC
CACCGCGACG TGCTGGCCGC CTGCGAAGCC TGGCCGCGCC ATGTGCTCAA GGCCACGCCC
GGCGACATCG TGATGGGCTC GCCGCCGCTG GCCTTCACCT TCGGGCTGGG CGGCCTGCTG
GTCTTCCCGA TGTGGGCTGG CGCCTCTAGC TACTACCCGT CGATTCCCTA CACGCCCGAG
GCCATGGTCC AGCTTATCCG GCAGGTGGGT GCGACGATCT GCTACACCGC GCCGACGTTC
TACCGCCAGA TGGCCGTATT TGCCAGGCAG CAGGGCCTGC CCGATTTGCG GCTGTGCGTG
AGCGCCGGCG AAAGCCTGCC GGACGCCACG CGCCAGCTCT GGAAGGACGC CACCGGCATC
GAGATCATCG ACGGCATCGG CGCCACCGAG ATGTTCCACA TCTTCATTTC GTCAAGGCCC
GGCGACGTGC GCCGGGGCGC CATCGGCCAG GTCGTTCCCG GCTACAGCGC GAAAGTCGTC
GATCAGGAGG GCGCCGAAGT GCCGCGCGGC CGCATCGGCC GGCTGGCGGT GATCGGCCCG
ACCGGCTGCC GCTACCTCGA TGACGAGCGC CAGCGCAACT ACGTGAAGGA CGGCTGGAAC
TACCCCGGCG ACGCCTTCAC GCAGGACGAG GACGGCTATT TTTTCTACCA GGCGCGCGAC
GACGACCTGA TCATCACCGC CGGCTACAAC GTGGCCGGCC CGGAGGTCGA GGACGCGCTG
CTCAAGCACC CGGCGGTGGC CGAATGCGGC GTGGTCGGCG TTCCCGATCA AGACCGGGGG
ATGGTCGTCA AGGCCTTCGT GGTGCTCAGG CCCGGCCAGG CCGGCGATGC CGCGATGGTC
AAAACACTTC AGGACCATGT CAAGGCCATG CTGGCGCCGT TCAAGTACCC GCGCCAGATA
GAATTTCTGT CCAGGCTACC GCGTACCGAA ACCGGCAAGC TGCAACGCTT CAAACTGCGC
CAGCCATGA
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| Protein sequence | MTSSITAPCA QTDRFVHEHL PPPDQWPRRV YPPGTDIPEQ ANLVNALFTR AIQNGHADRP
LLRSDRITLS YADALERVNR IAQVLTEDFH LVPGNRVLLR GGNSIGMALA WLGVVQAGLV
AVATMPLLRA KELVEIIDKA RPALALCDGA LLEELQIAQA QTGALQTVIP FNLMDAPGSM
AALAARKDGR FTPCPVAADD IALMAFTSGT TGKPKAAVHS HRDVLAACEA WPRHVLKATP
GDIVMGSPPL AFTFGLGGLL VFPMWAGASS YYPSIPYTPE AMVQLIRQVG ATICYTAPTF
YRQMAVFARQ QGLPDLRLCV SAGESLPDAT RQLWKDATGI EIIDGIGATE MFHIFISSRP
GDVRRGAIGQ VVPGYSAKVV DQEGAEVPRG RIGRLAVIGP TGCRYLDDER QRNYVKDGWN
YPGDAFTQDE DGYFFYQARD DDLIITAGYN VAGPEVEDAL LKHPAVAECG VVGVPDQDRG
MVVKAFVVLR PGQAGDAAMV KTLQDHVKAM LAPFKYPRQI EFLSRLPRTE TGKLQRFKLR
QP
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