Gene Pnap_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3618 
Symbol 
ID4687336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3850269 
End bp3850745 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID639836631 
ProductMarR family transcriptional regulator 
Protein accessionYP_983835 
Protein GI121606506 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.271372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGG AAGCACGCGG CCACAGCGAA CACCCCGAGG CCTTGCGCCT GTGGCTGCGC 
ATGCTCACGC TCACGCAGCT GGTCGAAAAG CAGGTGCGCA GCCAGCTGCG CGAGCAGTTC
GGCACCACGC TGCCGCGCTT TGACCTGATG GCGCAGCTCG AACGCAAGCC CGAGGGCCTG
AAGATGAACG AGCTGTCGCG CCGCATGATG GTGACCGGCG GCAACGTCAC CGGCATCACC
GACCAGCTGG TGGCCGAAGG GCTGGTCGAG CGGATCGAGG TCGAAGGCGA CCGCCGCGCC
TACCGGGTGC GCCTGACGCC GCGCGGCCGC ACCGAATTCG GCGCGATGGC GCGCCAGCAC
GAAGGCTGGA TCGTCGCCGC GTTCGAAGGC CTCTCGCTCG CCGAGGTCGA TGCCCTGCAC
CAGCTGCTGG GCAAGGTCAA GCAGCATTAC AACGACATCC CCCTGGAGAC GACATGA
 
Protein sequence
MDMEARGHSE HPEALRLWLR MLTLTQLVEK QVRSQLREQF GTTLPRFDLM AQLERKPEGL 
KMNELSRRMM VTGGNVTGIT DQLVAEGLVE RIEVEGDRRA YRVRLTPRGR TEFGAMARQH
EGWIVAAFEG LSLAEVDALH QLLGKVKQHY NDIPLETT