| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3595 |
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| Symbol | |
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| ID | 4689354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3819672 |
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| End bp | 3820508 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639836608 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_983812 |
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| Protein GI | 121606483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC ACACTCCCCC CAAACCTCCT GCCTCCGGCG CCGTGCGCGT GCGCATCCAG
CCGGCCGATG CCGGTGCCCC CGCGCCGACC GTGCGCCTGA ACAAACGCAT GGCCGACCTC
GGCCTGTGCT CGCGCCGCGA AGCCGACGAC TGGATTGCCC GGGGCTGGGT GCGCGTCAAC
GGGCTGCCTG CCGTGATGGG CCAGCCGGTG GCCGCCAATG CGCGCATCGA AGTCGCCCGC
GAAGCCGAGC AGCAGCAGCG CCAGCAGGTC ACCATCCTGA TCAACAAGCC GGTCGGCTAC
GTCAGCGGCC AGGCCGAGGA CGGCCACGAG CCGGCGGTGG CGCTGGTGCA GCCCGAGAAC
CGCTGGCGCG AATGCAACAG CCGCATGCGC TGGGGCTTTG AGCAGCTGCG CGGCCTGGCG
CCGGCCGGCC GGCTCGACAT CGACTCGATT GGCCTCTTGG TGCTGACGCA GGACGGCCGC
GTGGCGCGCC AGCTCATCGG CGAAGACTCG GACATGGAAA AGGAATATCT GGTGCGCGTG
AGCTACGGCG CTGAAAACGT CAACGTGCAG GCCGCGTTTC CGCGCGAAAA GCTGGCCCTG
CTGTGCCACG GCTTGAGCCT GGACGGCCAG CTGCTGCGCC CGGCGCAGGT CAGCTGGCAA
AACCCCGAGC AGCTGCGCTT TGTGCTCAAG GAAGGCAAGA AGCGCCAGAT CCGCCGCATG
TGCGAGCAGG TCGGGCTGTT CGTGACCGGC CTGAAGCGCG TGCGCATCGG CCGCGTCAAC
CTGGGCCACC TGCCGATTGG CCAGTGGCGC TACCTGATGC CGCACGAGCA GTTCTGA
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| Protein sequence | MSEHTPPKPP ASGAVRVRIQ PADAGAPAPT VRLNKRMADL GLCSRREADD WIARGWVRVN
GLPAVMGQPV AANARIEVAR EAEQQQRQQV TILINKPVGY VSGQAEDGHE PAVALVQPEN
RWRECNSRMR WGFEQLRGLA PAGRLDIDSI GLLVLTQDGR VARQLIGEDS DMEKEYLVRV
SYGAENVNVQ AAFPREKLAL LCHGLSLDGQ LLRPAQVSWQ NPEQLRFVLK EGKKRQIRRM
CEQVGLFVTG LKRVRIGRVN LGHLPIGQWR YLMPHEQF
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