Gene Pnap_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3587 
Symbol 
ID4687328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3810387 
End bp3812276 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content62% 
IMG OID639836600 
Productheat shock protein 90 
Protein accessionYP_983804 
Protein GI121606475 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC AAACCCTTTC CTTCCAGGCC GAAGTCGCCC AGCTCCTCAA GCTGGTCACC 
CATTCGCTCT ACTCCAACCC CGACATTTTT CTGCGAGAGC TGATCTCCAA CGCCTCGGAC
GCCTGCGACA AGCTGCGCTT CGAGGCCCTG AACGATGCCG GCCTGTATGA AAACGACAGC
GAGCTGAAGG TGCGCGTCAG CTTTGACAAG GCCGCCAAGA CCTTGACCAT CACCGACAAC
GGCATTGGCA TGTCGCAGCA GGAAGCGATT GAGCACCTCG GCACCATCGC CAAGAGCGGC
ACGCGCGACT TCGTGGCCAA GTTGTCGGGC GACCAGAAGA ACGACGCGCA GCTGATCGGC
CAGTTCGGCG TCGGCTTTTA CTCGGGCTTC ATCGTCGCCG ACAAGATCAC CGTCGAAAGC
CGCCGCGCCG GCCTGCCCGC CGCCCAGGGC GTGCGCTGGG TGAGCGAAGG CACGGGCGAG
TTCGACGTCA GCGAGACCCT GCGCGCCGAG CGCGGCACCA GCATCATCCT GCACCTCAAG
GACGACGCGG CCGACTACCT GAACGCCTGG AAGCTCAAGG GCATCATCAA CAAGTATTCC
GACCATATCT CGCTGCCCAT CCTGATGCCC AAGGAAGAGT GGAAGGAAGG CGAAAACGAC
CAGCCCGGCG AAATGGCCTT CACTGGCGAA TGGGAAACCG TCAACCAGGC CGCCGCCCTC
TGGACGCGCC CCAAGAAAGA CATCACGCCC GAGCATTACG CCGAGTTCTA CAAGCAGATC
AGCTACGACA GCGAAGCGCC GCTGGCGACC ACGCACAACC GCGTCGAGGG CGCGACCGAA
TACACCCAGC TGCTGTTCAT CCCGGCCAAG GCGCCGATGG ACATGTACAA CCGCGACAAG
GCCGCCGGCG TCAAGCTCTA TGTCAAGCGC GTCTTCATCA TGGACGATGC GCAGGCGCTG
CTGCCGACCT ACCTGCGCTT TGTCAAGGGC GTGGTCGATT CGTCCGACCT GCCGCTCAAT
GTGTCGCGCG AGTTGCTGCA GGAAAGCCGC GCCGTGAAGG CGATCCGCGA AGGCTGCACC
AAGCGCGTGC TGTCGATGAT TGAAGACCTG GCCAACAACG AGCCAGAAAA ATTCAAGACC
TTCTACGCCG AATTCGGCGC GGTGCTCAAG GAAGGCCTGG GCGAGGATTT CGCCAACCGC
GAGCGCCTAG CCAAGCTGCT GCGCTTTGCC AGCTCGACCA CCGACACGAC CACGGTCAGC
TTTGCCGACT ACAAGGCGCG CATGAAGGAC GGCCAGGACG CGATCTACTA CATCACCGCC
GACACGCTGG CCGCCGCCAA GAGCAGCCCG CAACTCGAGA TCTTCCGCAA GAAGGGCATC
GAAGTGCTCT TGATGGCCGA CCGGGTCGAT GAATGGGCGC TGAACTACCT GAACGAGTTC
GACGGCACGC CGCTGCAGTC GGTCGCCAAG GGCGCGGTCG ATCTGGGCAA GCTGCAGGAC
GAGGACGAGA AAAAAGCCGC CGAAGAAGCG CAGACCCAGT TCAAGCCCAT CCTTGACAAG
CTCAAGGAAG CCTTGAAAGA CAAAGCCTCT GACGTTCGCG CCACCTCGCG GCTGGTCGAT
TCACCGGCTT GTCTGGTGGT GCAGGACGGC GACATGTCCA CGCAGCTCGC CCGCATGCTC
AAGCAGGCCG GCCAGACCGT GCCCGAAGTC AAGCCCATCC TCGAAGTCAA TGCCCAGCAC
CCGCTGGTCA GAAAGCTCGA AGCCAGCAGC GAACTGGCCA GCTTCGACGA CCTGGCCAAC
ATCCTGTTCG ATCAGGCCCT GCTGGCCGAA GGCGGCATGC CCACCGACCC GGCCGCCTAT
GTGCGCCGCG TGAACGCCTT GCTGGTGTAA
 
Protein sequence
MQKQTLSFQA EVAQLLKLVT HSLYSNPDIF LRELISNASD ACDKLRFEAL NDAGLYENDS 
ELKVRVSFDK AAKTLTITDN GIGMSQQEAI EHLGTIAKSG TRDFVAKLSG DQKNDAQLIG
QFGVGFYSGF IVADKITVES RRAGLPAAQG VRWVSEGTGE FDVSETLRAE RGTSIILHLK
DDAADYLNAW KLKGIINKYS DHISLPILMP KEEWKEGEND QPGEMAFTGE WETVNQAAAL
WTRPKKDITP EHYAEFYKQI SYDSEAPLAT THNRVEGATE YTQLLFIPAK APMDMYNRDK
AAGVKLYVKR VFIMDDAQAL LPTYLRFVKG VVDSSDLPLN VSRELLQESR AVKAIREGCT
KRVLSMIEDL ANNEPEKFKT FYAEFGAVLK EGLGEDFANR ERLAKLLRFA SSTTDTTTVS
FADYKARMKD GQDAIYYITA DTLAAAKSSP QLEIFRKKGI EVLLMADRVD EWALNYLNEF
DGTPLQSVAK GAVDLGKLQD EDEKKAAEEA QTQFKPILDK LKEALKDKAS DVRATSRLVD
SPACLVVQDG DMSTQLARML KQAGQTVPEV KPILEVNAQH PLVRKLEASS ELASFDDLAN
ILFDQALLAE GGMPTDPAAY VRRVNALLV