| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3577 |
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| Symbol | |
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| ID | 4688743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3800883 |
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| End bp | 3802121 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836590 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_983794 |
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| Protein GI | 121606465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAA TTCAATCAAA AATAATACCG ACCGCCTGCC GCCTGCTGGC GACGAGCCTG
CTGGGTTTGA CTGCCGCCGG GGCGCTGGCG CAAACAACCG GTGGAGCGGC GCTGGTGCCG
ATACAAATCG GGGTGATCGC CCCGCTGAGC GGGCCTTCGG CCGACTTTGG CGTGCCCATG
CTCAATGGCG TCAAGCTGGC GGTGGACGAG ATCAACGCCG CTGGCGGCTT CCTGGGACGA
AAGCTCGAAC TGGTGGTCAA GGACGATGGT GCCAATCCGG ACCAGGGCCG CAAGGCGTCC
GAAGAACTGG CCGCGCAAAA GATCACGGCC GTCATCGGTT TTTGCAACAC GGGCGTGGCG
GCAAAATCGC TGGAGGTGTT TCAGAACAGC AAGATCCCGC TCATCATTCC CTGCGCGACC
GGCACCCAGC TCACGGCCAA ATACCCCGCG CCAGACAGCT ACATCTTTCG CACTTCCGCC
AAGGACGCCG TTCAGTCCAG CTTTGTGGTC GATGACATCT TCAAGCGCGG CTGGACCAAG
GTGGCGGTGT TTGCCGACAG CACCGCTTAC GGCGAGTCGG GCTTGAAGGA CGTGACAGCG
GCCCTGGCCA GCCATGGCCT CAAGCCGGTC CATGTGGCGC GCTTTCCTAT TGGCGTGAAG
GACGTGACGG CCGAACTCAA GGCCGCCCGC GATGCCGGAG CCAACGCGGT GTTCAGCTAC
AGCCTGGGCC CCGAGAGCGT CGCCATTGCC CTGGGGCGCA AGGAGCTGGG CTGGAAGGTG
CCGCAGGTGG GCGCCTGGGC CTTGAGTTTT CCGGCTTATG TGAATGTCGC CAAGGAAGCG
GCGGAAGACA CGCTGATGGC CCAGACCTTC ATCGTGGAGC AGCGCGGCAA CGAACGCCGG
ACGGCTTTCC TGAATGGCTA CATGGCCAAA TACAAGCTCA AGAGCGTGCC GGCGTCGATT
CCCGCAGCGC AGGCTTATGA CAGCACCTAC CTGCTGCTTT ACAGCCTGTT CGGGGTGCGC
AGCGCTTCAC TGGACGGCCC GGCCATCAAG GCATCGCTGG AAAACCTGAA AAAGGTGTAT
TACGGCGCGG TCGCCACCTA CGACCATCCG TTCAGCGCCA GCGACAAGGA TGCGTTCACC
GCCAACATGC TGCTGCTGGG CATGGTCAAG GGTGGCGTCG TGACCTACGC CTACCCCGCC
GACATCAAGC GCAATGTGTT TGCGCAGCGC AAGCAGTAG
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| Protein sequence | MFSIQSKIIP TACRLLATSL LGLTAAGALA QTTGGAALVP IQIGVIAPLS GPSADFGVPM
LNGVKLAVDE INAAGGFLGR KLELVVKDDG ANPDQGRKAS EELAAQKITA VIGFCNTGVA
AKSLEVFQNS KIPLIIPCAT GTQLTAKYPA PDSYIFRTSA KDAVQSSFVV DDIFKRGWTK
VAVFADSTAY GESGLKDVTA ALASHGLKPV HVARFPIGVK DVTAELKAAR DAGANAVFSY
SLGPESVAIA LGRKELGWKV PQVGAWALSF PAYVNVAKEA AEDTLMAQTF IVEQRGNERR
TAFLNGYMAK YKLKSVPASI PAAQAYDSTY LLLYSLFGVR SASLDGPAIK ASLENLKKVY
YGAVATYDHP FSASDKDAFT ANMLLLGMVK GGVVTYAYPA DIKRNVFAQR KQ
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