| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3574 |
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| Symbol | |
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| ID | 4686644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3797761 |
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| End bp | 3798615 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836587 |
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| Product | ABC transporter |
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| Protein accession | YP_983791 |
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| Protein GI | 121606462 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG AAGCCACCAC CTCAACATCC CAGCCGCCAG CGATTGCGGT GCAGGCCCCC
CAGCCGGCCC TGCTGCGGCC GCCGCAGATC AGCTGGCGCT GGTGGCCGGT GTTCCGGCGC
AACCTGCTGG TCTGGCGCAA GCTGGCCGTT CCCAGCCTGG TCGGCAACAT CGCCGAGCCG
CTGATCACGC TGGTCGCCTT TGGCTACGGG CTGGGCATGC TGATCGGGCA GGTGCAGTTG
AATGGCAGCC CGGTGCCCTA CATCCTGTTC CTGGCCAGCG GCTCGATCTG CATGAGCGCG
ATGAATGCCG CGTCGTTCGA GGCGCTGTAT TCGGCGTTTT CGCGCATGCA TGTGCAAAAA
ACATGGGACG GCATCATGAA CGCGCCGGTG CGGCTGGACG ACGTGGTGTT CGCCGAAATG
CTGTGGGCCG CGTACAAGTC GCTGTTCACC AGCGCGGTCA TTTTGGCGGT GATGCTGGCG
CTGGGCATCA GCCACAGCCC GATGCTGATT TTGGCGCTGC CGCTCTTGGG GCTGGTGGGC
ATCGTCTTTG CCAGCATCGC GCTGATCTTC AACGCACTGG CCAAGGGCTA TGACTTTTTC
ACTTATTACT TTTCGCTGTT CCTGACGCCG ACGATGTTCC TGAGCGGCGT GTTTTTCCCG
CGCGACCAGC TGCCCGGCGT GATGCGCGTC ATCTCCGACT GGCTGCCGCT GACCGCCGCC
GTCGAGCTGA TCCGCCCGCT GTTCCTGGAC CAGTGGCCGG CGCAGGGCCT GCGGCACCTG
GCCGTGCTGG TGGTCTATGG CGTGGCCGCG TTCTGGATCG CGCTGGCGCT GACGCGCAGG
CGGTTTCGGA ACTAA
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| Protein sequence | MTTEATTSTS QPPAIAVQAP QPALLRPPQI SWRWWPVFRR NLLVWRKLAV PSLVGNIAEP
LITLVAFGYG LGMLIGQVQL NGSPVPYILF LASGSICMSA MNAASFEALY SAFSRMHVQK
TWDGIMNAPV RLDDVVFAEM LWAAYKSLFT SAVILAVMLA LGISHSPMLI LALPLLGLVG
IVFASIALIF NALAKGYDFF TYYFSLFLTP TMFLSGVFFP RDQLPGVMRV ISDWLPLTAA
VELIRPLFLD QWPAQGLRHL AVLVVYGVAA FWIALALTRR RFRN
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