Gene Pnap_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3572 
Symbol 
ID4686089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3796152 
End bp3796742 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID639836585 
Producthypothetical protein 
Protein accessionYP_983789 
Protein GI121606460 
COG category[S] Function unknown 
COG ID[COG3915] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCCATTTCCT GAACGCCTCC CTGGCCGGCG CGGTGGCCAT GCCTTCCTGG 
GCCGCGGCCC AAGGCAGCCG CCGGGCCCCG GCAGGCCCGA CGCTGCTGAC GGTCAGCGGC
CGCATCGGCG CGGGCAACCG TGGCCCGCTG GACCCGGCGC TCGACCAGAT GATGGCCAAG
CAAAAAATCA TGTTCGACAA GGCGCAGGTG TTTGACTTTG CCGCCATCAC CGCCCTGCCG
GCCGTCACCA TCCAGCCGAC GCTCGAATAC GACGGCAAGC CGCATTCGCT CAAGGGGCCG
CTGCTGCTGG ACGTGATGAA GGCCTGCGGC GTGAAGGCGG GCGACAAGAC CATGCTGTTC
CTGCGCGCCG TCGATGGCTA CGCGGCGCAG GTTTCCGCCG CCGATGCGGG CAAATACCGC
TTCATCGTGG CGACGCACCT TGACGGCCAG CCGATGGCGC TGGGTGGACT CGGTCCGCTG
TGGGGCGTCT ATGATGCCGA CCGCTTTCCC GACATGGCGG CCAAACCCCT GCCCGCGCGC
TTTGCCAACT GCCCCTGGGC CACCTACCAC ATCGAGGTCA GGGAAGGCTA A
 
Protein sequence
MKKRHFLNAS LAGAVAMPSW AAAQGSRRAP AGPTLLTVSG RIGAGNRGPL DPALDQMMAK 
QKIMFDKAQV FDFAAITALP AVTIQPTLEY DGKPHSLKGP LLLDVMKACG VKAGDKTMLF
LRAVDGYAAQ VSAADAGKYR FIVATHLDGQ PMALGGLGPL WGVYDADRFP DMAAKPLPAR
FANCPWATYH IEVREG