Gene Pnap_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3567 
Symbol 
ID4690175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3790004 
End bp3790807 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID639836580 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_983784 
Protein GI121606455 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG CCATCACCCC CGAAACCACC CCGCGCGCCC TGCCCATCCT GGCCGGCAAG 
AAAGGCCTGA TCGTCGGCAT TGCCAACGAC CAGAGCATCG CCTACGGCTG CGCGCAGGCC
ATGCAGGAAC TGGGCGCCAC GCTGGCCATC ACCTACTTCA ACGCCAAGGC CGAGCCGCAT
GTGCGCCCGC TGGCCGCGCA GTTCGGCGCC GACATCATCG TGCCGCTCGA CGTGGAGCAG
CCCGGCCAGC TCGAAGCGGT GTTTGCGCAG ATCGAGCAGC GCTGGGGCAA ACTGGACTTC
GTGCTGCACG CAATCGCCTT TGCGCCGGCG GCCGACCTGC ACGGCCGCAT CGTTGACAGC
AGCGCCGAGG GCTTTTCCCG CGCCATGGAT GTGTCGTGCC ATTCGTTCAT CCGCATGGCC
AGGCTGGCCG AGCCGCTGAT GACGCAGGGC GGCACGCTGG TCACGATGAG CTACTACGGC
GCGCAAAAGG TCATCGACCA CTACGGCATC ATGGGGCCGG TCAAGGCCGC GCTTGAAGCC
ACGGTGCGCT ACCTGGCCGC CGAACTCGGC CCCGCCGGCA TCCGCGTGCA TGCGGTGTCG
CCCGGCCCGA TCAAGACGCG GGCGGCATCG GGCATCGGGG ATTTCGAGCA ATTGCTGGAC
GATGCCGCGA GCCGCGCACC CCAGCACCAG CTGGTGACCA TCGCCGACGT CGGCGCCGTC
ACCGCCATGC TGTGCAGCGA CGCAGCCCGC GCGCTGACCG GCAACGTCAC CTATGTCGAT
GCCGGCTACC ACGTCATGGG CTAA
 
Protein sequence
MNTAITPETT PRALPILAGK KGLIVGIAND QSIAYGCAQA MQELGATLAI TYFNAKAEPH 
VRPLAAQFGA DIIVPLDVEQ PGQLEAVFAQ IEQRWGKLDF VLHAIAFAPA ADLHGRIVDS
SAEGFSRAMD VSCHSFIRMA RLAEPLMTQG GTLVTMSYYG AQKVIDHYGI MGPVKAALEA
TVRYLAAELG PAGIRVHAVS PGPIKTRAAS GIGDFEQLLD DAASRAPQHQ LVTIADVGAV
TAMLCSDAAR ALTGNVTYVD AGYHVMG