| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3552 |
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| Symbol | |
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| ID | 4688705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3773602 |
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| End bp | 3774246 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836565 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_983769 |
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| Protein GI | 121606440 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGGCA TGACACAACG CTCGCAAAGC TCAGGCGAGG AAATCGCCAA CAGCGTCAGC
CACGCTGTCG CACTGCTGGC CGCTGTCGGC GCGGTGCCGT TTTTGATGGC TTCGGCGCGC
AACCGGAGCG CGGCGAGTTT TGCCGGCGTC ATGGTTTTTG CCGCGACCAT GGTGTTGCTC
TACCTGACCT CGACGGTTTA CCACGCGCTG CCCGACGGCC GCGCCAAGCG CATCTTCCTC
AAGCTCGACT ACGGCGCGAT TTACCTGTTC ATTGCCGGCA GCTACACGCC TTTCGCGCTG
GGCGCGCTCG GGGGCGCATG GGGCTGGACG CTTTTTGCGC TGGTGTGGCT GCTTGCGGCC
GTGGGCGTGG CGCTGAAGGT TTTCGGCCGG TTGACGCACC CCTGGCTCTC AACGGGTTTG
TACGTCTTCA TGGGCTGGCT GGTCCTGGTT GCGGCGGTGC CACTCGTCAG TCAGGTTCCG
TTGATCAGCC TGCTGTGGCT GGTGGCCGGT GGGCTGGCTT ACACTTCCGG CGTCGTGTTC
TTCGTGCTGG ACTCCAGAAT CCGATACTCG CATGCGGTTT GGCATGGGTT CGTCGCGGCC
GGCACCGGTT GCCACACTTT CGCGGTGCTG AGTTACGCGA CATGA
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| Protein sequence | MRGMTQRSQS SGEEIANSVS HAVALLAAVG AVPFLMASAR NRSAASFAGV MVFAATMVLL
YLTSTVYHAL PDGRAKRIFL KLDYGAIYLF IAGSYTPFAL GALGGAWGWT LFALVWLLAA
VGVALKVFGR LTHPWLSTGL YVFMGWLVLV AAVPLVSQVP LISLLWLVAG GLAYTSGVVF
FVLDSRIRYS HAVWHGFVAA GTGCHTFAVL SYAT
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