| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3544 |
|---|
| Symbol | |
|---|
| ID | 4686514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3764633 |
|---|
| End bp | 3766000 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639836558 |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
|---|
| Protein accession | YP_983762 |
|---|
| Protein GI | 121606433 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01424] glutathione-disulfide reductase, plant |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT TTGATTTTGA CCTGTTCGTG ATTGGCGGCG GCAGCGGCGG CGTGCGCGCT
GGCCGCATGG CCGCGCAGCG CGGCGCCCGC GTCGCGCTGG CCGAAGTGGC GGCGATGGGC
GGCACCTGCG TGAACCTGGG CTGCATCCCG AAAAAGCTCT ACAGCTATGC GGCCCACTTC
GCCGAAAGCT TCGAGGAATC GCACGGCTTT GGCTGGGTCG GCGAAGCGCC CGTGCTGAAC
TGGGACACGC TCAAGTTCAA CCGCGCCAGA GAGATTTCAC GCCTCAACGG CATTTACGGG
CAACTGCTCA AAAGCGCCGG CGTCCACGTC ATCAACGGCT GGGCCACGCT GGCGGGTGCG
CACACGGTCG AGGTCGGCGG CCAGCACTAC AGCGCCAAGA ACATCCTGAT CGCCACCGGC
GGCAAGCCCA GCACGCCGGA GGTGCCGGGA TGCGAGCATG TCATCAGTTC CAACGAGATC
TTCGACCTGT CGCCCTTTCC GCAGCGGCTG CTGGTGGTGG GCGGCGGCTA CATCGCCTGC
GAGTTTGCGT CGATCTTCAA CGGGCTGGGC GCCAGCGTCA CCCAGCTCTA CCGGGGGCAC
CAGGTGCTGC GCGGCTTTGA CGACGAAGTG CGCGGCTTCA TCGCCGGCGA AATGGTCAAG
TCCGGCGTGA AGCTGCACCT GAACACCGAT GTGGCGGCCA TCGAGCGCAC CGACGCGGGC
CTGCAGGTGC GGCTGCTCGA CGGCAGCCAC ATCACGGTCG ATGCCGTGCT CTACGCCACC
GGCCGGGTGC CGCTGGTCGC CGGCCTGGGA CTGGAAGCGG CCGGCGTCAG GCAAGGCAAG
GCCGGGGCGA TTGAGGTCAA CGAGCAATAT CAAACGTCGG TGCCGTCGAT CTACGCGCTG
GGCGACGTGA CCGCGCGCGT GCAGCTCACG CCGGTGGCGC TGGCCGAGGC GATGGTGGTG
GTTGACGCGC TGTTTGGCCC GCCCGAGGGC AAGCAACCGC GCGGCATGAG CTACGACTTC
ATCCCGACGG CGGTGTTTAC CCATCCGAAC ATCGGCACGG TCGGCTATTC GCAGGCCGAC
GCCATCGAGA AATTCGGCAA GGTCACGGTG TACCGCAGCG ACTTCAAGGC GCTCAAGCAC
ACGCTGAGCG GCAGCACCGA GCGCACGCTG ATGAAGCTGA TCGTCGAGGA CGCCACCGAC
CGGGTCGTCG GCCTGCACAT GGTCGGCGCC GACGCCGGCG AAATCGTCCA GGGCTTTGCC
GTGGCCATGA AGGCCGGCGC CACCAAGGCC ATTTTTGACA GCACGATCGG CATTCACCCG
ACGATGGCCG AAGAATTCGT GACGATGCGC GAGCCGGTCC AGCGCTGA
|
|---|
| Protein sequence | MADFDFDLFV IGGGSGGVRA GRMAAQRGAR VALAEVAAMG GTCVNLGCIP KKLYSYAAHF
AESFEESHGF GWVGEAPVLN WDTLKFNRAR EISRLNGIYG QLLKSAGVHV INGWATLAGA
HTVEVGGQHY SAKNILIATG GKPSTPEVPG CEHVISSNEI FDLSPFPQRL LVVGGGYIAC
EFASIFNGLG ASVTQLYRGH QVLRGFDDEV RGFIAGEMVK SGVKLHLNTD VAAIERTDAG
LQVRLLDGSH ITVDAVLYAT GRVPLVAGLG LEAAGVRQGK AGAIEVNEQY QTSVPSIYAL
GDVTARVQLT PVALAEAMVV VDALFGPPEG KQPRGMSYDF IPTAVFTHPN IGTVGYSQAD
AIEKFGKVTV YRSDFKALKH TLSGSTERTL MKLIVEDATD RVVGLHMVGA DAGEIVQGFA
VAMKAGATKA IFDSTIGIHP TMAEEFVTMR EPVQR
|
|---|
| |