| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3532 |
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| Symbol | |
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| ID | 4686178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3751272 |
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| End bp | 3752324 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836546 |
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| Product | porin |
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| Protein accession | YP_983750 |
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| Protein GI | 121606421 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.869887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA ATTTGATTAC GGTGGCCTTG CTCGGTTGGG CTGCTTGCGC TTCGGCACAG
TCGAGCGTCA CCCTGTATGG CGTCGCCGAT GGCTGGGTCG GTCAAACGAC CAGCAAGGCC
GGGACGGCGC CTACCGACAG AACCAGCGTC GTGGAAAGCG ATGGCCTGTC AGCCAGCCGA
TGGGGCATTC GTGGCTCGGA AGACTTGGGA GGCGGCCTGC GCGCCAACTT TGTGCTGGAG
CAGGCTGTCA GCATCGACAA CGGCACGATC AAGAACGTAT CGGCCTCGAA CGTCGGCTTC
AACCGCGCGG CCTATGTCGG CCTGTCCGGC GGCTTCGGCG AGGTGCGGCT GGGCCGCATG
CTGGGCGCAT TTGACGCTTT GCGCGGCCCT TTCAACCAGT TGTATGACGC TTCGGGCTTT
GCATCCACCG GCACGGTCTG GGGCCTGGGC ACCACGGCAT CTAGCTCTCA GGCGGCAGTG
ACCAGCAGCG ACTACCTGGC GCGCCTCAAC AACACCTTCA TGTATGCAAC GCCGGTGTTG
GGCGGTTTCA GTGGATCCAT GAGTTACAGC CCCGGAGAAG GCATCACCAC CGCCACGGCA
GCGCCGCGCA GCATTTCCAG CCATGTGAAA TATGCCAATG GTCCACTCAA GATTGGCTAC
GGCTACCAGG CCGAGCACTA CACCACCGGC ACCAACAAGT TCAAGCTGGC GTCTGGCGCC
TATGACTGGG GCGTTGCCAG GTTGGTGGCC TCCATTCAGC GGCAGGACGA CAGCCGCATC
GCTGGCGGCC AGTCCGCCAA CGAATGGCAG GCCGGCGTTG ATGTGCCGTT CGGCGCGGCC
ATTCTGGCGG TCGGTTACGC CAGCTCGAAA ACCAAGAACG CCGCCGGCGT CGAGGTGGCC
GATGCCCGGG GTTTGAGCCT GATGGGCATC TACAGCCTGA CGAAACGCAC CCGGCTTTAC
GCCGCCCTGC GCAAGGTTGA CGCCAGGCGC ACCGATGGAA GCACCTCCAC GGAAGCATCG
CGCTATGGCA TTGGCGTCAG CCACACGTTC TGA
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| Protein sequence | MKRNLITVAL LGWAACASAQ SSVTLYGVAD GWVGQTTSKA GTAPTDRTSV VESDGLSASR
WGIRGSEDLG GGLRANFVLE QAVSIDNGTI KNVSASNVGF NRAAYVGLSG GFGEVRLGRM
LGAFDALRGP FNQLYDASGF ASTGTVWGLG TTASSSQAAV TSSDYLARLN NTFMYATPVL
GGFSGSMSYS PGEGITTATA APRSISSHVK YANGPLKIGY GYQAEHYTTG TNKFKLASGA
YDWGVARLVA SIQRQDDSRI AGGQSANEWQ AGVDVPFGAA ILAVGYASSK TKNAAGVEVA
DARGLSLMGI YSLTKRTRLY AALRKVDARR TDGSTSTEAS RYGIGVSHTF
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