Gene Pnap_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3508 
Symbol 
ID4688013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3723566 
End bp3724540 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID639836522 
Producthypothetical protein 
Protein accessionYP_983726 
Protein GI121606397 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.578909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTA TTTCCCGCCG AACCCTGATC ACCGCCGCCG GACTCGGCGC GGCCGCCTGG 
CTCAACCCGG TGCGTGCGCA ACTCGCCGGC AAGCCCCTGA CCCTGATCGT TCCCGCAGCG
GCCGGCGGCA CCACCGACAT TGCCGCGCGC ATGCTGGCCG AGCCGCTGGG CAAGATTCTG
CAAACCTCGG TGGTCGTGGA CAACCGCAGC GGCGGCAACG GCAACATCGC CGGCCAGATG
GTGGCGCGCG GCCCGGCCGA TGGCTCCAGC CTGCTGGTGC AGTACTCGGG CTACCAGTGC
ATCACGCCGC TGATCCAGCC GGTGCCGGGG TTCGACCCGG CCACCAGCCT CAAACCCATC
GCCCACCTGA TCGACGCGCC GCAGTTGCTG GTGGTGCGCG CCAATTTTCC GGCCGACACC
TTTGCCGAGT TCCTCAAGTA CGTCAAGGCC AACCCCGGCA AGGTCAACTA CGCCTCCAGC
GGCAACGGCT CGCTGCAGCA TGTGACCACC GAGCTGCTGA AAGACCTGAC CCACACGTTC
ATGACCCACA TTCCCTACCG GGGCACCGGT CCGGCGCTCA ACGACCTGCT GGCTGGCACG
GTGGACTTCA CCATCACCAC GCCGCCGCCG CTGCTGCCGC ACGTGCGCGC CGGCAAGCTC
AAGGCGCTGA TGGTGACCGG CCGCGCGCGC CTGCCGGCGC TGCCGAATGT GCCAACGGCC
ACGCAAGTCG GCGTTCCGCT GGTGGCGTCC TCGTGGTTTG CGGTGTATGG GCCTGCCAGC
CTGCCCAGCG AGTTGCAAAA TCGCCTGTCG CTGGCGATCA AACAGGTGGT GGAGTCGGAC
AACTTCAAAA AGCGCGCGGA AGACCAGGGC GCCAAGGCCG TGGTCATGAA CAGCGCGGAG
CTGGCCACGC TGGGCGCCAA TGAACGCAAG ATGTGGGAGC GCATCGTGAA GGTGGCCAAT
ATCAAGGCCG ACTGA
 
Protein sequence
MTLISRRTLI TAAGLGAAAW LNPVRAQLAG KPLTLIVPAA AGGTTDIAAR MLAEPLGKIL 
QTSVVVDNRS GGNGNIAGQM VARGPADGSS LLVQYSGYQC ITPLIQPVPG FDPATSLKPI
AHLIDAPQLL VVRANFPADT FAEFLKYVKA NPGKVNYASS GNGSLQHVTT ELLKDLTHTF
MTHIPYRGTG PALNDLLAGT VDFTITTPPP LLPHVRAGKL KALMVTGRAR LPALPNVPTA
TQVGVPLVAS SWFAVYGPAS LPSELQNRLS LAIKQVVESD NFKKRAEDQG AKAVVMNSAE
LATLGANERK MWERIVKVAN IKAD