Gene Pnap_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3493 
Symbol 
ID4688649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3707218 
End bp3707559 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content53% 
IMG OID639836507 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_983711 
Protein GI121606382 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.572012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.600215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAT CAAACGAACT GCAGCAGCAA ATCGACGACT ACCAAGCCAA ACTGAACGAG 
TTGCGCAAGC AGCAGGAAGC GGAACGCAAG GGCGAACGCA CGCAAGCCAT CATCTCAGCC
AAGGAGTTAA TCAAGACTTA TGACTTGACG GCTTCAGATC TTGGATTTTC AGGCAAGGGC
GCCGCCAAAA AAGTCACGGG CGACAAACGC AATGTGGTCG CCCCCAAATA CCAGGATCCC
GACAGCGGAA AAACATGGAC CGGTCGCGGA AAGTCTCCCG CCTGGTTAAG CGCTCAATTG
GCCACAGGCC GCGACAAGCA AGAGTTTCTA ATCCAGCACT AA
 
Protein sequence
MTKSNELQQQ IDDYQAKLNE LRKQQEAERK GERTQAIISA KELIKTYDLT ASDLGFSGKG 
AAKKVTGDKR NVVAPKYQDP DSGKTWTGRG KSPAWLSAQL ATGRDKQEFL IQH