| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3478 |
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| Symbol | |
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| ID | 4688405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3690787 |
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| End bp | 3691530 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836492 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_983696 |
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| Protein GI | 121606367 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.346656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.546304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA GCCCACTTCC TGTCAAAAGC GTCCGTCCTT CATCCCGAAA GGCGGGTGCG
TCCAAAAACC CGCAAAAAGG CCAGCAGACC AAGGCCGCCA TCGTCGAGGC GGCGCTCGGC
CTGGCCACCC ACATCGGCCT GGAAGGCCTG AGCATCGGCG CGCTGGCCGA GGTCATGCGG
ATGAGCAAGT CGGGCGTCTT TTCCCATTTC GGCTCGCGCG AAGAACTGCA GATTTCGGTG
ATTCGCGAGT ACCACGCGCG GTTCGAGGAC GAAGTGTTTG CCCCGGCGCT CAAGCAGCCG
CGCGGCCTGC CGCGCCTGCA GGCCATGTTC GCCAACTGGA TGAACCGCAC CTCGGTCGAA
ATCGATTCGG GCTGCATCTA CATCAGCGGC GCGGTTGAAT TCGACGACCG GCCCGGCCCG
GTGCGCGACG CACTCGTCGA TTCGGTGCGG ACCTGGCTGG CCGCGATGCA CCGGGCCGTG
GTACAGGCCA GCGAGGCGGG TCATCTGTAC CCGGATGCCG ATGCGCAGCA GGTGGCCTTC
GAGATCCATG GCCTGATCCT GGCGCTGCAC TACGAAGCCC GCTTCCTGAA GACACCCGAT
TCCATCGCCC GCGCCAGGAC GGGCTTTGCC AACATCCTGG CGCGCTATGG CGGCACGGCC
GCGCCCGCCG AAGCGCCTGC CGGTTCCAGC GCCCCAGCGT CCTCAAAAGT TTTGCCGAAA
CCTTCCCCTT CCACACCCGC TTAA
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| Protein sequence | MSASPLPVKS VRPSSRKAGA SKNPQKGQQT KAAIVEAALG LATHIGLEGL SIGALAEVMR
MSKSGVFSHF GSREELQISV IREYHARFED EVFAPALKQP RGLPRLQAMF ANWMNRTSVE
IDSGCIYISG AVEFDDRPGP VRDALVDSVR TWLAAMHRAV VQASEAGHLY PDADAQQVAF
EIHGLILALH YEARFLKTPD SIARARTGFA NILARYGGTA APAEAPAGSS APASSKVLPK
PSPSTPA
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