| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3476 |
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| Symbol | |
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| ID | 4689156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3686493 |
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| End bp | 3688925 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836490 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_983694 |
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| Protein GI | 121606365 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.734498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGTT TCCAGGTCAA GAAAGTCGCC GTGCTCGGCG CGGGCGTGAT GGGCGCGCAA
ATCGCCGCCC ATCTGGTCAA CTGCCGGGTG CCGGTGGTGC TGTTCGATCT GCCGGCCAGG
GATGGCCCGA AAAACGGCAT CGTCAGCAAG GCCATCGAGG GCCTGAAAAA GCTCAAGCCC
GCGCCGCTCG GTGTGGTTGA AGATGCGGCG CTGATCCAGC AGGCCAACTA TGAAGAACAC
ATGGATGTTC TGAAAGAGTG CGACCTGATC ATCGAGGCGA TTGCCGAGCG CATGGACTGG
AAGACTGATC TTTATCACAA GATCGCGCCT TTCGTGGCCG AAGGCGCCAT CGTCGCCAGC
AACACCTCGG GCCTGTCGAT CACCACGCTC AGCGAGGCGC TGCCGGACAG CCTCAAGCCG
CGCTTTTGCG GCATCCATTT CTTCAACCCG CCGCGCTACA TGGCGCTGGT CGAGCTGATC
AACACGCCGA CGACCGAAGC CGCCGTGCTC GACGACCTGG AAGCCTTCGT GACGACCGCG
CTGGGCAAGG GCGTGATCCG CGCGCACGAC ACGCCCAACT TCATCGCCAA CCGCGTCGGC
ATCGCCGGCA TGCTGGCGAC CATCCATGAA GCCGATGCCT TCGGCCTGAC GTATGACGTG
GTGGATGATT TGACCGGCAA GAAGCTGGGC CGCGCCAGTT CGGGCACCTT CCGCACCGCC
GACGTGGTCG GGCTGGACAC GATGGCGCAT GTGATCAAGA CGCTGCAGGA CAACCTCGGC
CCCGTGGGAA GTGGCAAGGT CGAAGACCCG TTCTCAGGCA TCTACGGCAC GCCGCCGGTG
CTGGCCCGGC TGCTGGAGGC CAAAAGCCTG GGCCAGAAGA CCGGCGCTGG TTTCTACAAG
AAGGTCGGCC GCGACATCCT GCGGCTGGAC CCGGAAAGCA TGGACTATGT GGCCGGCGGC
GCCAAGGCCG ACGAAGTGGT CGGCCGCATG CTGAAAAAGC CGGCCGGCGA GCGCCTGAGC
CTGCTGCGCC ATGCCGAAGG CGCGGAGCCG CGCTTTCTCT GGGCCGTGCT GCGCGACCAG
TTCCACTACG CCGCCGTGCA CCTCGCCAGC ATCGCCGAAA CCGCGCGCGA CATCGACTTT
GCGATGCGCT GGGGATTCGG CGCGAAGCAG GGGCCGTTCG AACTGTGGCA GGAAGCGGGC
TGGCTGCAGG TGGCGAACTG GATCAGGGAA GACATCGAAG CCGGCAAGGC GCTGAGCACC
GCGCCGCTGC CCGACTGGGT GTTCAGCGGG CCAGTGGCTG AAGCCGGCGG CGTGCACACG
CCCGAAGGCT CGTGGAGCGC CTCTGGCCAG AAGTTCATTG CGCGCCGCAA GCTGCCGGTC
TATGCGCGCC AGCATTTTCC CGAGGATGTG CTGGGCGCCA ACGCGCCCGC GTTCGAGACC
GCCGGCACGA CGCTGCACGA GGACGATGCG ATTCGCCTCT GGACGCTGGA CGGCGCGAAC
GGCGAAGCAG GCGACGTGCT GATCGCCAGC ATCAAGACCA AGATGCACGC CATCAGCCCC
GACGTGGCCG AAGGCCTGGC GCTGGGCGTT GAGCTGGCCG AGAAAGGCTA CAAGGGCCTG
GTGATCTGGT CCAACCACGA GATGTTCTCG GCCGGCGCCG ACCTGCAGTC GATGCTGCCG
GCCTTCATGA TGGGCGGCGC CGCGATGATC GAAGGCGTCG AGGCCGAATT GCAGAAGGTG
ATGCTCAAGC TGCGCTATGC GGCCGTGCCG GTGGTGTCGG CGATTCGCGG CCTCGCCCTG
GGCGGCGGCT GCGAGATGGC GGTGTATTCG GCCAGACGCG TGGCGGCCAT GGAGAGCTAC
ATCGGCCTGG TCGAAGTCGG CGTGGGCCTG GTGCCCGGCG CGGGCGGGCT GGCCTATATT
GCGCGCCGCG CCGCCGAGAA CGCGGCCAAA TCGAGCAACA AGGACTTGCT GCCCTTCCTG
CTGGAGGGCT TCACCGCCGC CGCCATGGCG ACGGTCGGCA CCAGCGCGCT GGAAAGCCGC
AAGCTGGGCT ATTTGCTCGA CAGCGACGTG GTCGTGCCGA ACAAGGACGA ACTGCTGTTC
GTCGCGCTGA ACGAAGCGCG CGCGCTCCAC GCCTCGGGCT ACCGCCCGCC GCTGCGCCGG
CTGTTCCCGG TGGCCGGGCG CAACGGCGTG GCGACCATCA AGGGCCAGCT GGTCAATATG
CGCGACGGCG GCTTCATCAG CGCGCACGAC TTTCACATCG CCAGCCTGAT CGCGGGCGTG
GTCTGCGGCG GCGATGTCGA TGCCGGCACG CTGGTCACCG AGGAATATTT GATGACCCTG
GAGCGCAAGG CCTTCTGCGC GCTGCTGGAG CACCCAAAGA CGCAGGAACG CATCATGGGC
ATGATGAGCA CCGGCAAGCC TGTCCGCAAC TGA
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| Protein sequence | MSSFQVKKVA VLGAGVMGAQ IAAHLVNCRV PVVLFDLPAR DGPKNGIVSK AIEGLKKLKP
APLGVVEDAA LIQQANYEEH MDVLKECDLI IEAIAERMDW KTDLYHKIAP FVAEGAIVAS
NTSGLSITTL SEALPDSLKP RFCGIHFFNP PRYMALVELI NTPTTEAAVL DDLEAFVTTA
LGKGVIRAHD TPNFIANRVG IAGMLATIHE ADAFGLTYDV VDDLTGKKLG RASSGTFRTA
DVVGLDTMAH VIKTLQDNLG PVGSGKVEDP FSGIYGTPPV LARLLEAKSL GQKTGAGFYK
KVGRDILRLD PESMDYVAGG AKADEVVGRM LKKPAGERLS LLRHAEGAEP RFLWAVLRDQ
FHYAAVHLAS IAETARDIDF AMRWGFGAKQ GPFELWQEAG WLQVANWIRE DIEAGKALST
APLPDWVFSG PVAEAGGVHT PEGSWSASGQ KFIARRKLPV YARQHFPEDV LGANAPAFET
AGTTLHEDDA IRLWTLDGAN GEAGDVLIAS IKTKMHAISP DVAEGLALGV ELAEKGYKGL
VIWSNHEMFS AGADLQSMLP AFMMGGAAMI EGVEAELQKV MLKLRYAAVP VVSAIRGLAL
GGGCEMAVYS ARRVAAMESY IGLVEVGVGL VPGAGGLAYI ARRAAENAAK SSNKDLLPFL
LEGFTAAAMA TVGTSALESR KLGYLLDSDV VVPNKDELLF VALNEARALH ASGYRPPLRR
LFPVAGRNGV ATIKGQLVNM RDGGFISAHD FHIASLIAGV VCGGDVDAGT LVTEEYLMTL
ERKAFCALLE HPKTQERIMG MMSTGKPVRN
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