Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3472 |
Symbol | |
ID | 4686263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3682073 |
End bp | 3683731 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836486 |
Product | L-lactate transport |
Protein accession | YP_983690 |
Protein GI | 121606361 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0353521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.697356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAGC AAATATACGA CCCCTTTGGC AACATGTTCA TCTCGACGCT GCTGGCCGCG ATTCCGGTGG TGGTGATGCT GGTGTGCCTT GGCTTTCTTC ACATCAAGGC GCATATCGCG GCCGGCCTGG GCCTGATCGC GGCCATTCTG GTGGCGGTGT TTGCCTACGG CATGCCGGCG GACATGGCCG GCCGGGCTGC CCTGTATGGC GGCTTCACCG GCTTGCTGCC GATTGGCTGG ATCGTGCTGA ACATCATCTT CTTGCAGCAG CTGGCCGAGC AGAACGGCAG CTTCAAGATA CTGCAGGACT CGCTCTCGGG CATCACCGCC GACCGCCGGC TGCAGCTGCT GCTGATCGCC TTTTGCTTCG GCGCGTTTTT TGAAGGCGCT GCGGGCTTCG GCACGCCCGT GGCGGTGACC GCCGGCATTT TGATCGGCCT GGGCTTTTCG CCGCTGGCTG CGTCGGGCCT GTCGCTGATC GCCAACACCG CGCCGGTGGC CTTCGGCGCG CTGGGAACGC CGGTCATCAC GCTGGCCAAG GTTCACGGCT ACGACCTGAT GGAAGTCACC GCCATGATCG GCCGCCAGCT GCCGCTGTTC TCGCTGATGG TGCCGTTCTG GCTGATCTGG GCGTTTGCCG GGCGCAAGGC GATGATGGAA ATCTGGCCGG CCATTCTGGT GACCGGCCTG TCGTTCGCCA TTCCGCAGTA TTTGGTCAGC AATTTCATCG GCCCCGAGCT GGTGGACATC ATCGCCGCCA TCGTCTCCAT GGTCTCGCTG GTGCTGTTCT TGCGCGTCTG GCAGCCCAAG AAAATCTGGA CCTCGCCGTC GCTCAAGGGC CACGACGTCA GCGCGCATGA AGCCAAGCCA CCAGCGCCCA TCGTCATTCA TGACCGCGCC GCGCTGATCC GCGCCTGGAC GCCGTGGGTG ATCTTGTCGG TGTTTGTCTT CGTCTGGGGC CTGCCGCCGG TCAAGGCCTG GCTCAACAGC ATCTTCGCGC CCTCGTTCCC GATGGCCGGA CTGCACAACC TGATCGAAAA AGTGCCGCCC GTGGTGCCGA CACCGCACAA GGAATCGGCC GTTTACGTGC TCAACCTGCT CTCAGCCACG GGCACCGGCA TCCTGATCTC GGCCATCATC AGCGCGCTGA TCATGAAGTA CAACCCGATT GAAATCGCCA AGACCTTTTT CCGCACGCTG TGGCTGGTGC GCTATTCGCT GCTGACGATT GTGCTGATGC TGGCGCTGGG CACGCTGACG CGCTACTCGG GCACCGACAC GACGCTGGGC CTGGCGTTTG CCAACAGCGG CGTGTTCTAT CCGTTCTTCG GCACGCTGAT GGGCTGGATC GGCGTGGCGA TGACCGGCTC GGACACCGCC TCGAACGTGC TGTTCGGCGG CATGCAGCGG GTGGCCGCAG AGCAGCTGGG CCTGTCGCCC AACCTGATGG GCGCGGCCAA CAGCTCGGGC GGCGTGATGG GCAAGATGAT CGACGCGCAG TCCATCGTCG TCGCCTCGAC CGCCACCAAG TGGTTCAACC ACGAAGGCGA CATCCTGCGC TACGTGTTCA TCCACTCCGT CGTGCTGGCC TGCCTGGTCG GCCTGTTTGT CAGCCTGCAG GCCTATGTCT GGCCGTTCAC GCTGATGGTC GTGCATTAA
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Protein sequence | MWQQIYDPFG NMFISTLLAA IPVVVMLVCL GFLHIKAHIA AGLGLIAAIL VAVFAYGMPA DMAGRAALYG GFTGLLPIGW IVLNIIFLQQ LAEQNGSFKI LQDSLSGITA DRRLQLLLIA FCFGAFFEGA AGFGTPVAVT AGILIGLGFS PLAASGLSLI ANTAPVAFGA LGTPVITLAK VHGYDLMEVT AMIGRQLPLF SLMVPFWLIW AFAGRKAMME IWPAILVTGL SFAIPQYLVS NFIGPELVDI IAAIVSMVSL VLFLRVWQPK KIWTSPSLKG HDVSAHEAKP PAPIVIHDRA ALIRAWTPWV ILSVFVFVWG LPPVKAWLNS IFAPSFPMAG LHNLIEKVPP VVPTPHKESA VYVLNLLSAT GTGILISAII SALIMKYNPI EIAKTFFRTL WLVRYSLLTI VLMLALGTLT RYSGTDTTLG LAFANSGVFY PFFGTLMGWI GVAMTGSDTA SNVLFGGMQR VAAEQLGLSP NLMGAANSSG GVMGKMIDAQ SIVVASTATK WFNHEGDILR YVFIHSVVLA CLVGLFVSLQ AYVWPFTLMV VH
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