Gene Pnap_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3472 
Symbol 
ID4686263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3682073 
End bp3683731 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content63% 
IMG OID639836486 
ProductL-lactate transport 
Protein accessionYP_983690 
Protein GI121606361 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0353521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.697356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAGC AAATATACGA CCCCTTTGGC AACATGTTCA TCTCGACGCT GCTGGCCGCG 
ATTCCGGTGG TGGTGATGCT GGTGTGCCTT GGCTTTCTTC ACATCAAGGC GCATATCGCG
GCCGGCCTGG GCCTGATCGC GGCCATTCTG GTGGCGGTGT TTGCCTACGG CATGCCGGCG
GACATGGCCG GCCGGGCTGC CCTGTATGGC GGCTTCACCG GCTTGCTGCC GATTGGCTGG
ATCGTGCTGA ACATCATCTT CTTGCAGCAG CTGGCCGAGC AGAACGGCAG CTTCAAGATA
CTGCAGGACT CGCTCTCGGG CATCACCGCC GACCGCCGGC TGCAGCTGCT GCTGATCGCC
TTTTGCTTCG GCGCGTTTTT TGAAGGCGCT GCGGGCTTCG GCACGCCCGT GGCGGTGACC
GCCGGCATTT TGATCGGCCT GGGCTTTTCG CCGCTGGCTG CGTCGGGCCT GTCGCTGATC
GCCAACACCG CGCCGGTGGC CTTCGGCGCG CTGGGAACGC CGGTCATCAC GCTGGCCAAG
GTTCACGGCT ACGACCTGAT GGAAGTCACC GCCATGATCG GCCGCCAGCT GCCGCTGTTC
TCGCTGATGG TGCCGTTCTG GCTGATCTGG GCGTTTGCCG GGCGCAAGGC GATGATGGAA
ATCTGGCCGG CCATTCTGGT GACCGGCCTG TCGTTCGCCA TTCCGCAGTA TTTGGTCAGC
AATTTCATCG GCCCCGAGCT GGTGGACATC ATCGCCGCCA TCGTCTCCAT GGTCTCGCTG
GTGCTGTTCT TGCGCGTCTG GCAGCCCAAG AAAATCTGGA CCTCGCCGTC GCTCAAGGGC
CACGACGTCA GCGCGCATGA AGCCAAGCCA CCAGCGCCCA TCGTCATTCA TGACCGCGCC
GCGCTGATCC GCGCCTGGAC GCCGTGGGTG ATCTTGTCGG TGTTTGTCTT CGTCTGGGGC
CTGCCGCCGG TCAAGGCCTG GCTCAACAGC ATCTTCGCGC CCTCGTTCCC GATGGCCGGA
CTGCACAACC TGATCGAAAA AGTGCCGCCC GTGGTGCCGA CACCGCACAA GGAATCGGCC
GTTTACGTGC TCAACCTGCT CTCAGCCACG GGCACCGGCA TCCTGATCTC GGCCATCATC
AGCGCGCTGA TCATGAAGTA CAACCCGATT GAAATCGCCA AGACCTTTTT CCGCACGCTG
TGGCTGGTGC GCTATTCGCT GCTGACGATT GTGCTGATGC TGGCGCTGGG CACGCTGACG
CGCTACTCGG GCACCGACAC GACGCTGGGC CTGGCGTTTG CCAACAGCGG CGTGTTCTAT
CCGTTCTTCG GCACGCTGAT GGGCTGGATC GGCGTGGCGA TGACCGGCTC GGACACCGCC
TCGAACGTGC TGTTCGGCGG CATGCAGCGG GTGGCCGCAG AGCAGCTGGG CCTGTCGCCC
AACCTGATGG GCGCGGCCAA CAGCTCGGGC GGCGTGATGG GCAAGATGAT CGACGCGCAG
TCCATCGTCG TCGCCTCGAC CGCCACCAAG TGGTTCAACC ACGAAGGCGA CATCCTGCGC
TACGTGTTCA TCCACTCCGT CGTGCTGGCC TGCCTGGTCG GCCTGTTTGT CAGCCTGCAG
GCCTATGTCT GGCCGTTCAC GCTGATGGTC GTGCATTAA
 
Protein sequence
MWQQIYDPFG NMFISTLLAA IPVVVMLVCL GFLHIKAHIA AGLGLIAAIL VAVFAYGMPA 
DMAGRAALYG GFTGLLPIGW IVLNIIFLQQ LAEQNGSFKI LQDSLSGITA DRRLQLLLIA
FCFGAFFEGA AGFGTPVAVT AGILIGLGFS PLAASGLSLI ANTAPVAFGA LGTPVITLAK
VHGYDLMEVT AMIGRQLPLF SLMVPFWLIW AFAGRKAMME IWPAILVTGL SFAIPQYLVS
NFIGPELVDI IAAIVSMVSL VLFLRVWQPK KIWTSPSLKG HDVSAHEAKP PAPIVIHDRA
ALIRAWTPWV ILSVFVFVWG LPPVKAWLNS IFAPSFPMAG LHNLIEKVPP VVPTPHKESA
VYVLNLLSAT GTGILISAII SALIMKYNPI EIAKTFFRTL WLVRYSLLTI VLMLALGTLT
RYSGTDTTLG LAFANSGVFY PFFGTLMGWI GVAMTGSDTA SNVLFGGMQR VAAEQLGLSP
NLMGAANSSG GVMGKMIDAQ SIVVASTATK WFNHEGDILR YVFIHSVVLA CLVGLFVSLQ
AYVWPFTLMV VH