| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3458 |
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| Symbol | |
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| ID | 4687112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3668131 |
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| End bp | 3669030 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836472 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_983676 |
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| Protein GI | 121606347 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AGATTGCCAC TTTGACGCTT GCCCTGCTCG CGTCTGGCGC CGTTTTTGCC
CAGGCAAGCG ACACCGTTGC CAAGGTCAAG GCTTCCGGCG TGGTCACCAT GGGCGTTCGC
GATTCATCCG GCGCCCTGTC CTATACGCTG GGCGATGGCA AATACGTGGG CTACCACGTC
GAGATCTGCC AGCGCATCCT CGCCAACCTT GAAAAAGCCG CTGGCCGCAA GCTTGAAGTC
AAATACCAGC CCGTCACCTC GCAAAACCGC ATTCCGCTGG TTCAAAACGG CACGGTCGAT
ATTGAATGCG GCTCGACCAC CAACAATGCA ACCCGGGCCA AGGATGTGGC CTTCCTGCAC
ACCACCTTCG TCGAGGAAGT GCGCATTGCC GTGAAGACCA GCTCGGGCAT TACCTCGGTT
GCCCAGCTGA ACGGCAAAAA CGTCGCCACC ACCACCGGCA CCACTTCCGT GCAGACCTTG
CGTAGAAATG AACGCGCCAC GAATGTCAAC TTCAACGAGA TTTTCGGCAA GGACCATTCC
GACAGCTTTT TGCTGCTGGA GTCGGGCCGC GCCGATGCCT TCGTGATGGA CGGCTCCATC
CTGGCGGGCA ATATCGCGTC CGCCAAGAAC CCCGCCGATT TCAAGATCGT CGGTGAAGTG
CTGAGTGTCG AGCCGATTGC GATCATGATC CGCAAGGACG ATGCCGGCCT GAAGAAGATT
GGCGACGACA CCATCAACGG CCTGATTAAG AGCGGCGAAC TCGCCAAGCT CTATGACAAG
TGGTTCATGC AGCCGATTCC TCCGAAGGGC ACCCGCGTCG GCCTGCCGGC CAGCGAAAGC
ACCAAGGCGG CCTGGGCAAC GCCCAACGAC AAGCCGATGG AAGATTACGC CAAGAAGTAA
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| Protein sequence | MKFKIATLTL ALLASGAVFA QASDTVAKVK ASGVVTMGVR DSSGALSYTL GDGKYVGYHV
EICQRILANL EKAAGRKLEV KYQPVTSQNR IPLVQNGTVD IECGSTTNNA TRAKDVAFLH
TTFVEEVRIA VKTSSGITSV AQLNGKNVAT TTGTTSVQTL RRNERATNVN FNEIFGKDHS
DSFLLLESGR ADAFVMDGSI LAGNIASAKN PADFKIVGEV LSVEPIAIMI RKDDAGLKKI
GDDTINGLIK SGELAKLYDK WFMQPIPPKG TRVGLPASES TKAAWATPND KPMEDYAKK
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