| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3457 |
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| Symbol | |
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| ID | 4687370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3667300 |
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| End bp | 3667965 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836471 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_983675 |
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| Protein GI | 121606346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGATG AACGCCTGGG GCTGGACGCT GTCGGTGGCG GTTTCCGCCT CTGGGTCGTC
GCCATGGTGG TGGGGGCGCT GATGGGCACC TTGCGCACCC TGCCGAACAG CCCGTGGCTG
GTGCGGCTGG GCAATGTCTG GGTCGAGCTG TTTCGCAACA TTCCGCTGCT GGTGCAAATC
TTTTTGTGGT ACTTCGTCGT GCCCAAGATG TTCCCGGCCA TGCAGCAAAT ACCCGGCTTC
GTGCTGGTGG TGCTGGCGCT GGGCTTTTTC ACCTCGGCCC GGATTGCCGA GCAGGTGCGC
GCCGGCATCC AGGCGCTGGC GCGCGGCCAG CGCTATGCGG GCATGGCGCT GGGCTTCACC
ACGGCGCAGA CCTACCGTTA CGTGATCTTG CCGATGGCCT TTCGCATCAT TTTGCCGCCG
CTGACCAGCG AGTCGATGAA CCTCTTGAAG AACTCGTCGG TCGCCTTTGC GGTGTCGATT
GCCGAACTCA CCATGTTCGC GATGCAGGCG CAGGAAGAAA CCTCGCGCGG CGTTGAAATT
TACATCGCAG TCACCGCGCT GTACGCGATT TCAGCCTTTG CGGTGAACCG GTTGATGGCG
CTGGCGGAAA AGAAAATGCA GATTCCCGGC CTGATCATTG CCGGCGCTAC CGGTGGAGGA
CACTGA
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| Protein sequence | MDDERLGLDA VGGGFRLWVV AMVVGALMGT LRTLPNSPWL VRLGNVWVEL FRNIPLLVQI
FLWYFVVPKM FPAMQQIPGF VLVVLALGFF TSARIAEQVR AGIQALARGQ RYAGMALGFT
TAQTYRYVIL PMAFRIILPP LTSESMNLLK NSSVAFAVSI AELTMFAMQA QEETSRGVEI
YIAVTALYAI SAFAVNRLMA LAEKKMQIPG LIIAGATGGG H
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