Gene Pnap_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3455 
Symbol 
ID4687457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3665835 
End bp3666572 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID639836469 
ProductABC transporter related 
Protein accessionYP_983673 
Protein GI121606344 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGT TGAAAAACGT TTCCAAATGG TACGGCGATG TGCAGGTGCT CAACAACTGC 
AGCACCAGCA TCCAAAAAGG CGAGGTGGTC GTGGTTTGCG GGCCTTCGGG CTCCGGCAAA
TCGACGCTGA TCAAGGTCAT CAACGCCCTG GAGCCTTTCC AGAAAGGCCA GATTTTTGTC
GATGGCCAGG CCGTGCACGA CCCCAAGACC GATTTGCCCA AGCTGCGCTC TAGAGTCGGC
ATGGTGTTCC AGAACTTCGA GCTGTTTCCG CACCTGAGCG TGACCGAGAA CCTGACGCTG
GCGCAGATCA AGGTACTGGG CCGCAAGCCC GACGAAGCCA AGGCCCATGG CCTGAAATAC
CTGGACCGCG TCGGCCTGAT GCTGCACAAG GACAAGTTTC CCGGCCAACT GTCGGGCGGC
CAGCAGCAGC GCGTGGCGAT TGCCCGCGCC TTGAGCATGG ACCCGATTGC CATGCTGTTC
GACGAGCCGA CCTCGGCGCT TGACCCCGAA ATGGTCGGCG AAGTGCTCGA CTGCATGATG
GGGCTGGCCA ATGACGGCAT GACCATGATG GTGGTCACGC ACGAGATGGG GTTTGCCAAG
AAGGTCGGCA GCCGCGTGAT CTTCATGGAC GTGGGCGGAA AGATTCTGGA GGACTGCTCG
AAAGTCGAGT TCTTCAGCCA TCCCGAGAAC CGCCAGGCGC GCACCAAGGA CTTTTTGAAC
AAGATCCTGC AGCACTGA
 
Protein sequence
MIELKNVSKW YGDVQVLNNC STSIQKGEVV VVCGPSGSGK STLIKVINAL EPFQKGQIFV 
DGQAVHDPKT DLPKLRSRVG MVFQNFELFP HLSVTENLTL AQIKVLGRKP DEAKAHGLKY
LDRVGLMLHK DKFPGQLSGG QQQRVAIARA LSMDPIAMLF DEPTSALDPE MVGEVLDCMM
GLANDGMTMM VVTHEMGFAK KVGSRVIFMD VGGKILEDCS KVEFFSHPEN RQARTKDFLN
KILQH