Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3455 |
Symbol | |
ID | 4687457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3665835 |
End bp | 3666572 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639836469 |
Product | ABC transporter related |
Protein accession | YP_983673 |
Protein GI | 121606344 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGT TGAAAAACGT TTCCAAATGG TACGGCGATG TGCAGGTGCT CAACAACTGC AGCACCAGCA TCCAAAAAGG CGAGGTGGTC GTGGTTTGCG GGCCTTCGGG CTCCGGCAAA TCGACGCTGA TCAAGGTCAT CAACGCCCTG GAGCCTTTCC AGAAAGGCCA GATTTTTGTC GATGGCCAGG CCGTGCACGA CCCCAAGACC GATTTGCCCA AGCTGCGCTC TAGAGTCGGC ATGGTGTTCC AGAACTTCGA GCTGTTTCCG CACCTGAGCG TGACCGAGAA CCTGACGCTG GCGCAGATCA AGGTACTGGG CCGCAAGCCC GACGAAGCCA AGGCCCATGG CCTGAAATAC CTGGACCGCG TCGGCCTGAT GCTGCACAAG GACAAGTTTC CCGGCCAACT GTCGGGCGGC CAGCAGCAGC GCGTGGCGAT TGCCCGCGCC TTGAGCATGG ACCCGATTGC CATGCTGTTC GACGAGCCGA CCTCGGCGCT TGACCCCGAA ATGGTCGGCG AAGTGCTCGA CTGCATGATG GGGCTGGCCA ATGACGGCAT GACCATGATG GTGGTCACGC ACGAGATGGG GTTTGCCAAG AAGGTCGGCA GCCGCGTGAT CTTCATGGAC GTGGGCGGAA AGATTCTGGA GGACTGCTCG AAAGTCGAGT TCTTCAGCCA TCCCGAGAAC CGCCAGGCGC GCACCAAGGA CTTTTTGAAC AAGATCCTGC AGCACTGA
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Protein sequence | MIELKNVSKW YGDVQVLNNC STSIQKGEVV VVCGPSGSGK STLIKVINAL EPFQKGQIFV DGQAVHDPKT DLPKLRSRVG MVFQNFELFP HLSVTENLTL AQIKVLGRKP DEAKAHGLKY LDRVGLMLHK DKFPGQLSGG QQQRVAIARA LSMDPIAMLF DEPTSALDPE MVGEVLDCMM GLANDGMTMM VVTHEMGFAK KVGSRVIFMD VGGKILEDCS KVEFFSHPEN RQARTKDFLN KILQH
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