Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3454 |
Symbol | |
ID | 4687715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3664741 |
End bp | 3665769 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639836468 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_983672 |
Protein GI | 121606343 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA AAACCTTTCT CGGCCTGGCC ATGGCTGCCG CCGCGCTGGC CGTCGCCAAT GCCGCGCCCG CGCAGACCTA CAAGTCCGAA TACAAGATGT CGCTGGTGCT CGGCCCCGCC TACCCGTGGG GCAAGGGCGG CGAAATCTGG GCCAACCTGG TGCGCGAACG CACGCAGGGC CGCATCAACA TCAAGCTCTA TCCCGGCGTC TCGCTGATCC AGGGCGACCA GACGCGCGAG TTCAGCGCCA TCCGCCAGGG CGTGATCGAC CTGGCCGTGG GCTCGACCAT CAACTGGTCG CCGCAGGTCA AGGAGCTGAA TCTGTTCTCG CTGCCCTTCC TGATGCCCGA CTACGCCGCG ATGGACGCGC TGACCCAGGG CGACGTGGGC AATGAGATTT TCCAGATCAT CAACAAGGCC GGCGTGATGC CGCTGGCCTG GGGCGAAAAC GGCTACCGCG AGATCAGCAA TTCCAAGCTG GCCATCAGGA AGCCGCAAGA CCTAAAGGGC CTGAAAATCC GCGTCGTCGG CTCGCCGCTG TTCCTCGACA CCTTCACGGC GCTCGGCGCG AACCCGACCC AGATGAGCTG GGCCGATGCC CAGCCGGCAC TGGCCACCGG CGCGGTGGAC GGCCAGGAAA ATCCGATGGC GATCTACACC GCCGCCAGGC TGCAGACCAT GGCGCAAAAG CATGTGACGA TGTGGGGCTA TGTGGCCGAC CCGCTGATCT TCGTGGCCAA CAAGGACATC TGGGCTTCCT GGACGCCAGC GGACCAGGCC ATCGTCAAAC AGGCCGCGCT GGACGCCGGC AAGCAGGAAA TCGCCATCGC GCGCAAGGGC CTGGCCGAAG CCGACAAGCC GCTGCTCAAG GAAATCGCCA GCCATGGCGT GACCGTGACC CAGCTGAGCC CGCAGGAGCG CGATGCCTTC GTGAAGGCCA CGCGCCCGGT GTATGACAAG TGGAAGAACC AGATCGGCGC CAGCCTGGTC AATAGCGCTG AAAAGTCGAT TGCTGTGCGC AAGCAATAA
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Protein sequence | MKRKTFLGLA MAAAALAVAN AAPAQTYKSE YKMSLVLGPA YPWGKGGEIW ANLVRERTQG RINIKLYPGV SLIQGDQTRE FSAIRQGVID LAVGSTINWS PQVKELNLFS LPFLMPDYAA MDALTQGDVG NEIFQIINKA GVMPLAWGEN GYREISNSKL AIRKPQDLKG LKIRVVGSPL FLDTFTALGA NPTQMSWADA QPALATGAVD GQENPMAIYT AARLQTMAQK HVTMWGYVAD PLIFVANKDI WASWTPADQA IVKQAALDAG KQEIAIARKG LAEADKPLLK EIASHGVTVT QLSPQERDAF VKATRPVYDK WKNQIGASLV NSAEKSIAVR KQ
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