Gene Pnap_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3450 
Symbol 
ID4687766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3660553 
End bp3661680 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content65% 
IMG OID639836464 
Producthypothetical protein 
Protein accessionYP_983668 
Protein GI121606339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0757309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA TGAGCGCCTC ACTCGGGGCG AACGGCGCCC GGCAGGCGGC GCTGCTGATT 
GATGCAGACA ATTTTTCCGA CCCTCAAGCC ATCGACGCGG CCTGGGCTGA ACTGAACGCC
TATGCGGGCC GGGTCAGCGT GTGCCGCGCT TATGGCGCCG GGCCGCGCCT GGAGTGGCTG
CAGTCGGTGT GGCGTTATCT GGGAACGCGC ACCTTTCCCA ATTTGCCGCT GCAGAAAAAC
ACCACCGACG CGGCCCTGAT CGCCGACGCG GTGGCGCTGC ATTTCCAGCA AGGCATCCGG
CTGTTTGCGA TTGCCTCGGG CGACGCCGAC TTCGCCCCGC TGGCGGTGCG CCTGCGCGAA
TGGGGCTGCG AGGTGTGGTG CTTTTCGATG GAAGGCATTG TGTTTCGGGA TGCGGATGCT
TATTACGACC GCGTGAAGTG CTTTCCCGCC CCGGTGTTCA CCCCAGTGCC CGTCACGCCT
GCGCCACTGC GGCCCGTGGT GCCGTCCGCA CGGGGCGGCA ACGCCGATGC CGGTGCGGCC
ACCGCCGAAC CGCCAGCGTA CCGGGCGGCT GCCGCGCCCT TGAGCGCATC CCCGATGTTC
GATGCCGGCC TGCCCGACGA GGTGGCGCGT ATTTTGAACG CCGTGCCCGG TTTGCGCGAA
CGTCCGCAGC AGCTGTGCCA TGTCGTGCCG GTGTTGCAGC GGCACGGTTT TTTCGACAAA
AGAATCACCA GATCGACGGC GTTTTTGGCC CGGCACGCGG CATATTTTGA ATTGAGCCCT
GCGCACAAGC CGACGCTGCT GGCTTTTCGT GCGCCGCCAT CCTTGCAGGA TGCTGTGCCT
GACGAGCCTG CGCCAGCCAT TGCCGCTGGG GTGGCCAGCG TGTCACCAGA AGACGCGCAG
GCGCTGCAGC GCATCCTCGC GGCCTTTGCG ACGTGGCTGC CCGATACGGT CAGGCAATTG
AGCATGATGG ACACGCTGTT GCAGGAGGGC GGTGTCCAGA TCGGCAGCAA GCCCCTGCAT
GAGCTGTTTG GCGCGTACCC AGATTATTTC AAGCTCTTGC CCGCCACCGG CCCGGCCATG
AAGGTGCGGC TGCTCAAGAA ACCGGAAGGC TTTGCACTGG CTTGCTGA
 
Protein sequence
MSGMSASLGA NGARQAALLI DADNFSDPQA IDAAWAELNA YAGRVSVCRA YGAGPRLEWL 
QSVWRYLGTR TFPNLPLQKN TTDAALIADA VALHFQQGIR LFAIASGDAD FAPLAVRLRE
WGCEVWCFSM EGIVFRDADA YYDRVKCFPA PVFTPVPVTP APLRPVVPSA RGGNADAGAA
TAEPPAYRAA AAPLSASPMF DAGLPDEVAR ILNAVPGLRE RPQQLCHVVP VLQRHGFFDK
RITRSTAFLA RHAAYFELSP AHKPTLLAFR APPSLQDAVP DEPAPAIAAG VASVSPEDAQ
ALQRILAAFA TWLPDTVRQL SMMDTLLQEG GVQIGSKPLH ELFGAYPDYF KLLPATGPAM
KVRLLKKPEG FALAC