Gene Pnap_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3449 
Symbol 
ID4688576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3659810 
End bp3660484 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID639836463 
Productputative transmembrane protein 
Protein accessionYP_983667 
Protein GI121606338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0669267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAG CCGTCGCTGC GGGTGCGGCC CTGCCCGACG CCTTGAACCA TGCGCCAGCT 
GCCCCGGTGC GCTTCGTCCC CCAAGGCGCG CTGCCGCCCG GCCAGGGCTA CGAGCATTAC
ATGTTCCACA GCGGCCAATG CCCGACGCGC GACAACCTGC ATGACTTCTT CAACGGACTG
TGCTGGCTGC GCTTTCCCCG GACCAAGAAA AAAATCAACC AGCTGCATGC GGCTGAATTC
GCAGCCACGG CTGAAGGCGT GAATCCGCCG CTGCGCGGCC CGGTGCGCGA CGCGCTGACG
GTATTCGACG AAAACGCCGC CTTCCTGCTG GCGCCGCCGC TGCTGTGGGA AGCGCTGGAG
GCGCGCGACT GGCAGCGCCT GTTTATTGAT CTGCGCCCGT TATGGGCCGA GGCGCAGCTG
GTCTTGTTTG GCCACGCGCT GCTCGAAAAG CTGGTTCATG CACGAAAACC CATCACTGCG
CATATCTACC GGGCGCAACC AGCTATTGAT TCAATAGCAG AACTCGATGC CTGGGTGGCC
GGGGATTTGA GCGCCAGCAA GCTCGCCGGC AAGCCGTTCA CACCCTTGCC GGTGCTTGGC
GTGCCGGGCT GGTGGCCAGA GAACGAGGAC TTTTCCTTTT ATGATGACCA TGCGGTTTTT
CGCCCGCGCC GCTAA
 
Protein sequence
MAQAVAAGAA LPDALNHAPA APVRFVPQGA LPPGQGYEHY MFHSGQCPTR DNLHDFFNGL 
CWLRFPRTKK KINQLHAAEF AATAEGVNPP LRGPVRDALT VFDENAAFLL APPLLWEALE
ARDWQRLFID LRPLWAEAQL VLFGHALLEK LVHARKPITA HIYRAQPAID SIAELDAWVA
GDLSASKLAG KPFTPLPVLG VPGWWPENED FSFYDDHAVF RPRR