Gene Pnap_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3438 
Symbol 
ID4688683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3647308 
End bp3648288 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID639836452 
Producthypothetical protein 
Protein accessionYP_983656 
Protein GI121606327 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0699421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA AAACCTTCAT TCGCCATGGC CTGGCCTGTG CGCTAGCCCT GGCCGGCCTG 
TCAGTCCTGC CCGCCACGGC ACTGGCGCAA AGCTACCCGT CCAAGCCGGT CCGCGTGATC
ATTCCGTTCC CACCCGGCGG CACGCTGGAC ACCGTGGGCC GCCAGCTGGC ACAAAAGCTC
AGCGAGCAGA TGGGCCAGCC CTTCGTGGTT GAAAACCGTG CCGGCGGCAA CGGGACGATT
GGCGCCGACG CCGTGGCCAA GTCCCCGGCC GACGGCTACA CGCTGCTGTT CAATGCCTCG
ACCCTGACCA CCTCGACGCT GCTGCTGAAA ACCCCGCCCT ACGACGCGGC CAAGGACTTC
CAGCCCATCG CCCTGGTGGC CAAGGCGCCG CTGGCGGTCT CCATCAACAA GAACCTGCCC
ATCAAGGACA TCAAGGAACT GCTGGCCTAC GCCAAGGCCA ACCCCGGCAA GCTCAGCTTT
GCGATCGGCT CGAACGCGTC GGCCGGCCAC CTGTCCACCG AACTGCTCAA GCGCGCGGGC
GGCGTGAGCT ACCTGACCGT TCCCTACAAA GGCTCAGGCC CGGCCTACCA GGACCTGATC
GGCGGGCAGA TCGACGGCTT CGTCGATCCC ATCCTGGGCT CGATGCAGTA TTACAAGGGC
GGCATGCTCA AGATGATTGC CGTGACCTCC AAGGCGCGCG TTCCCACCCT GCCCGAGGTG
CCGACCGTCG GCGAAACCAT TCCCGGCTAC GAGTTCTACA GCTGGTACGG CCTCTGGGGT
CCGGCCAAGC TGCCGATGGA CATGGCGCGC AGGCTCAATG AAGAGGTCAA CAAGGCGCTG
GCCACCGACA TGCGCGACAG GCTGGTCCAG CAAGGCCTGC TTCTGGAGCC CGGCAGCATC
GACGACTTCG CGCGCTTCCA GCGCGAGGAC ACGGCGCGCT CGATGAAGAT CATCGCCGAC
GGAGGCATCC GTGGCGAATG A
 
Protein sequence
MQRKTFIRHG LACALALAGL SVLPATALAQ SYPSKPVRVI IPFPPGGTLD TVGRQLAQKL 
SEQMGQPFVV ENRAGGNGTI GADAVAKSPA DGYTLLFNAS TLTTSTLLLK TPPYDAAKDF
QPIALVAKAP LAVSINKNLP IKDIKELLAY AKANPGKLSF AIGSNASAGH LSTELLKRAG
GVSYLTVPYK GSGPAYQDLI GGQIDGFVDP ILGSMQYYKG GMLKMIAVTS KARVPTLPEV
PTVGETIPGY EFYSWYGLWG PAKLPMDMAR RLNEEVNKAL ATDMRDRLVQ QGLLLEPGSI
DDFARFQRED TARSMKIIAD GGIRGE