| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3436 |
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| Symbol | |
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| ID | 4689152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3645300 |
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| End bp | 3646241 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639836450 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_983654 |
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| Protein GI | 121606325 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCTG TCAACCGACC GCTTGACCTG GAATGGCTGG AGGATTTCCT CGCGCTGGCC
GAAAGCGGCA ATTTCTCGCG CGCCGCGCAG GCGCGCGCCA TCGCCCAGCC GGCGTTCAGC
CGCCACATCC GCGCGCTCGA AGAATGGGCC GGCGTCGAGC TGATCGACCG CGCCCGGCAT
CCGGCGGCGC CCACGCCGGC CGGCGAGGTG TTCGTGGTCA CGGCGCGCGA TGTGGTACTG
CGGCTGCTGC AGGCCCGCAC CCGTGCCCAC GAGGCGCACG AGCAGGCCAG CCGCAGCCTG
CAGTTCGCGG CCACGCATGT GCTGTCGCTG GCTTTTTTTC CGCGCTGGCT GCAACAGGTC
GAGCAGCAAG TGCAGCTCGG GGCTATCCAC ATGGTGTCGG ACAGCTACCA GGCCTGTGAA
GAACTCATGC TGCAGCGCCG CGTGCAGTTT TTGCTGTGCT ACGGCCACTC GGCCGTCAAG
ACCCGGCTGC TGCCGCCCGA GTTTGAATTT GCCTGCGTCG GCGAGGACCG GCTGGTGCCG
GTGAGCGCGC CCGATGCCGG CGGCCAGCCG CAGCATCAGA TTGATGGCGA CGCCCATGAA
CCCTTGCCGG TGCTGGCCTA CAGCGAGGCG TCGGGGCTGG GCCAGATCAT GCGCGACCGG
ATGCCGGGGG CGTTCGATGC GCAGCGCTTT AAGCCGGTGA TGACCTCGCA CCACGCCGTG
CTGCTCAAGA CCATGGCCCT TGAAGGGCGC GGTGTGGCCT GGCTGCCGCA CAGCCTGGTG
AGCGCCGAGA TGGCCGACAA GCGCTTGACG AGCGCGGCTG GCCCCGAATG GAGCATTCCG
CTGGAAGTCC GGCTTTTTCG CGCGACCGAC TCACTGGCGC CGACGGCCGA AGCGGTCTGG
GCGCAGGCGG CTGCGGGGCG GGCCGGGCCG AAAAATCCCT GA
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| Protein sequence | MGPVNRPLDL EWLEDFLALA ESGNFSRAAQ ARAIAQPAFS RHIRALEEWA GVELIDRARH
PAAPTPAGEV FVVTARDVVL RLLQARTRAH EAHEQASRSL QFAATHVLSL AFFPRWLQQV
EQQVQLGAIH MVSDSYQACE ELMLQRRVQF LLCYGHSAVK TRLLPPEFEF ACVGEDRLVP
VSAPDAGGQP QHQIDGDAHE PLPVLAYSEA SGLGQIMRDR MPGAFDAQRF KPVMTSHHAV
LLKTMALEGR GVAWLPHSLV SAEMADKRLT SAAGPEWSIP LEVRLFRATD SLAPTAEAVW
AQAAAGRAGP KNP
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