Gene Pnap_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3434 
Symbol 
ID4689138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3643555 
End bp3644268 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID639836448 
Producthypothetical protein 
Protein accessionYP_983652 
Protein GI121606323 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG TCCAACACCT GGTCACCGAA GACGATATTG CCGGCTTCCT GGCCAGCACG 
CCTGACTTTT TCGAGCGCCA TGCCGAACTG CTGGCTTCGG TACAGCTGTC CAGCGGCCAC
GGCGACCGCG CCATCAGCCT GCAGGAGCGC CAGGCCGTTT TGTTGCGCGA GAAGATCAAG
GGGCTGGAGA CGCAGATGGT CGAGATGATC CGCAACGGCC AGGACAACCT GGTGATTGCC
GGCAAGATGC ATGCGTGGAC CGGCAAGCTG CTGCAGGTGG TGCAGGCGCG CGACGTGCCC
GGCGCCATCG TGCAGGGACT GGCCAGCGAG TTGCAGATTC CGCAGGCCGC GCTCCGGGTC
TGGGGCATGG ATGACGCTTA CGCCGGCCAA AGTTTTGCGG CGCATGTCAG CGCGGACGCG
CAGGCGTTCG CGGCCTCCCT GAGCGCACCT TATTGCGGCG CCAATGACAA TTTTGAAGCC
GCCGGCTGGC TGCCGCAGGC CGCGCAGGCG CAGGCGCAGT CGCTGGCCTT GATTCCGCTG
CGCGCCGACA AGGACGCGCC AGTCTGCGGC CTGCTGGTGC TGGCCTCGCC CGATGCCCGG
CGCTTTCACA GCGGCATGGG CACCGAATTC CTCGAACGCC TGGGCGAGAT GGCCGGCGCG
GCGCTGTCGC GCCTGCGTGC GCCCGGCGCC GTAGCGGCAA GTCGGGTCGC CTGA
 
Protein sequence
MNPVQHLVTE DDIAGFLAST PDFFERHAEL LASVQLSSGH GDRAISLQER QAVLLREKIK 
GLETQMVEMI RNGQDNLVIA GKMHAWTGKL LQVVQARDVP GAIVQGLASE LQIPQAALRV
WGMDDAYAGQ SFAAHVSADA QAFAASLSAP YCGANDNFEA AGWLPQAAQA QAQSLALIPL
RADKDAPVCG LLVLASPDAR RFHSGMGTEF LERLGEMAGA ALSRLRAPGA VAASRVA