Gene Pnap_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3414 
Symbol 
ID4688567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3619934 
End bp3620725 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID639836428 
Productpolypeptide-transport-associated domain-containing protein 
Protein accessionYP_983632 
Protein GI121606303 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0285361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.709755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGC CAGTACCCCT GCCGCCAGAC GTCAGGCTCA TGAACACCGT GTCGGTGCTT 
CTGTGCCTGG GTTTTGCCGC CATGGTGCTG TCGCTGGGCA TGGCCTGGCT GGTACACCAG
CCGGCATTCA ACCTGAGCGC CATCCGGGTC GGCGGTGAAC TGACGCACAA CAACGCCGTC
ACCCTGCGTG CCAACGTGGC GCCCAAGCTG GCTGGCAATT TCCTCACGGT CGATCTGGAA
GCGACTCGCG AAGCCTTCGA GACCGTGCCC TGGGTTCGCC GGGCCGTGGT GCAGCGCGAA
TTTCCAAATC GCCTGAAGGT CGTGCTTTAT GAGCACAAGG CCGTGGCCTA CTGGGGGCCG
GAAGGCGATG CCCGGCTGGT CAACAACCAG GGTGAAGTGT TCGAGGCCAA CCCGGGCGAC
GTCGAAACCG AGGAGTTGCC GCTGCTCAGC GGACCCAAGG GTCAGGCGCC GCAGGTGTTG
CAGGCTTATC AGACGCTCCT TCCCCTGTTT GAAGAGATGG ATGCGGTGCT GGAGCAGTTG
CAGCTGAGTG AGCTGGGCAA CTGGCGCGCG CAACTCGACA GCGGCGCCGT GATTGAACTG
GGGCATGGCT CGCTGGCTGA AGTCCAGGCG CGTACACGGC GGTTTATTGA CACGGTGACG
CAGGTGGCGT CCCGGTTTGG ACGCGATGTG GAGTCAGCCG ACCTGCGTTA CGGCAGCGGC
TATGCGCTCA AGCTCCGAGG CGTCACCACC GGCGAGATCG GTGACAAAGA CGAGAAAAAA
AAGAAAAGGT AA
 
Protein sequence
MPLPVPLPPD VRLMNTVSVL LCLGFAAMVL SLGMAWLVHQ PAFNLSAIRV GGELTHNNAV 
TLRANVAPKL AGNFLTVDLE ATREAFETVP WVRRAVVQRE FPNRLKVVLY EHKAVAYWGP
EGDARLVNNQ GEVFEANPGD VETEELPLLS GPKGQAPQVL QAYQTLLPLF EEMDAVLEQL
QLSELGNWRA QLDSGAVIEL GHGSLAEVQA RTRRFIDTVT QVASRFGRDV ESADLRYGSG
YALKLRGVTT GEIGDKDEKK KKR