Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3414 |
Symbol | |
ID | 4688567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3619934 |
End bp | 3620725 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836428 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_983632 |
Protein GI | 121606303 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0285361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.709755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACTGC CAGTACCCCT GCCGCCAGAC GTCAGGCTCA TGAACACCGT GTCGGTGCTT CTGTGCCTGG GTTTTGCCGC CATGGTGCTG TCGCTGGGCA TGGCCTGGCT GGTACACCAG CCGGCATTCA ACCTGAGCGC CATCCGGGTC GGCGGTGAAC TGACGCACAA CAACGCCGTC ACCCTGCGTG CCAACGTGGC GCCCAAGCTG GCTGGCAATT TCCTCACGGT CGATCTGGAA GCGACTCGCG AAGCCTTCGA GACCGTGCCC TGGGTTCGCC GGGCCGTGGT GCAGCGCGAA TTTCCAAATC GCCTGAAGGT CGTGCTTTAT GAGCACAAGG CCGTGGCCTA CTGGGGGCCG GAAGGCGATG CCCGGCTGGT CAACAACCAG GGTGAAGTGT TCGAGGCCAA CCCGGGCGAC GTCGAAACCG AGGAGTTGCC GCTGCTCAGC GGACCCAAGG GTCAGGCGCC GCAGGTGTTG CAGGCTTATC AGACGCTCCT TCCCCTGTTT GAAGAGATGG ATGCGGTGCT GGAGCAGTTG CAGCTGAGTG AGCTGGGCAA CTGGCGCGCG CAACTCGACA GCGGCGCCGT GATTGAACTG GGGCATGGCT CGCTGGCTGA AGTCCAGGCG CGTACACGGC GGTTTATTGA CACGGTGACG CAGGTGGCGT CCCGGTTTGG ACGCGATGTG GAGTCAGCCG ACCTGCGTTA CGGCAGCGGC TATGCGCTCA AGCTCCGAGG CGTCACCACC GGCGAGATCG GTGACAAAGA CGAGAAAAAA AAGAAAAGGT AA
|
Protein sequence | MPLPVPLPPD VRLMNTVSVL LCLGFAAMVL SLGMAWLVHQ PAFNLSAIRV GGELTHNNAV TLRANVAPKL AGNFLTVDLE ATREAFETVP WVRRAVVQRE FPNRLKVVLY EHKAVAYWGP EGDARLVNNQ GEVFEANPGD VETEELPLLS GPKGQAPQVL QAYQTLLPLF EEMDAVLEQL QLSELGNWRA QLDSGAVIEL GHGSLAEVQA RTRRFIDTVT QVASRFGRDV ESADLRYGSG YALKLRGVTT GEIGDKDEKK KKR
|
| |