| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3408 |
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| Symbol | |
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| ID | 4687529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3614696 |
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| End bp | 3615445 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836422 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_983626 |
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| Protein GI | 121606297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.708574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.136163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAC TGGCGCGCCT GCTGGTCCTG GCCTTGCTGG CCGGCCTGGC GCTGCAGCTT
TATTTCGTGG CGCGCATCGC GCTGATGCGG GTCGTGAATC CCGAATCAAC GGCCTTTGAG
CGCTCGGAAG CCTGGCAGGT CGCCAGCAAC ACCGGCACGC TCAAATGGCG CCAGCAATGG
GTGCCCTACG CGCAGGTATC AAACCACCTC AAGCGCGCCA TCATTGCCTC GGAAGACGCC
AGCTTCACCG TGCACGAGGG CGTTGACATG GACGCGCTGG AAAAGGCCTG GGAGAAAAAC
ACCCAGGCCG AGGAACGCGC CGCGCAATCC ATGAGCCGGC TGGCCGAGGG CAAGTCCAAA
GCGCCGGCCG TGAAGCCGCC AAAAATATTT GGCGGCTCCA CCATCACCCA GCAACTGGCC
AAGAATTTGT TCCTGTCCGG CGAACGCACG CTGCTGCGCA AGGGCCAGGA GCTGCTGCTG
ACGCTGATGC TCGAATCCCT GCTCAGCAAG CAGCGCATCC TTGAGATTTA TCTCAACAAC
GTCGAATGGG GCGAAGGCGT TTTTGGCGCC GAGGCCGCCG CCCAGCACTA CTACCGCAAG
CCGGCCGCGC GCCTGAACGC CGTCGAGGCC GCCCGGCTGG CGGTGATGCT GCCCCGGCCC
AAGTATTTCG AGACCCACAC CGGCTCGGGC TACCTGGCCT CGCGCGCCCG GACCATCGCG
GCGCGCATGG GCGGCGTGGA AGTGCCATGA
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| Protein sequence | MKALARLLVL ALLAGLALQL YFVARIALMR VVNPESTAFE RSEAWQVASN TGTLKWRQQW
VPYAQVSNHL KRAIIASEDA SFTVHEGVDM DALEKAWEKN TQAEERAAQS MSRLAEGKSK
APAVKPPKIF GGSTITQQLA KNLFLSGERT LLRKGQELLL TLMLESLLSK QRILEIYLNN
VEWGEGVFGA EAAAQHYYRK PAARLNAVEA ARLAVMLPRP KYFETHTGSG YLASRARTIA
ARMGGVEVP
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