| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3406 |
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| Symbol | |
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| ID | 4686900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3612874 |
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| End bp | 3613788 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836420 |
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| Product | TonB family protein |
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| Protein accession | YP_983624 |
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| Protein GI | 121606295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.140923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACTG CAGCCGCCAG GCATCGCCCC GTGAAGCCGA AACCCCGCCC GTCCCTTGTG
AAATCACCCA GCACCCTGCA GATTGCCCTG GGTGTCTCGC TGGCTGCGCA TGCGGCGCTG
CTGGCGGTGC GTTTTGTCGA TCCGGAACGC TTCAACCGCG TGTTTCAGGA CACGCCGCTT
GAAGTGATCC TGGTCAACAC CAAATCCACC GAGACGCCCG ATGAACACGC CAAGGCGATT
GCGCAGGCGT CGCTGGCCGG CGGCGGCGAG CTTGAAAAAG GCCGCGCCAC CTCGCCGCTG
CCGCCGGCCC TGGTGATGAA GACCGGCGAT GCGCAGGAAG ATGAAAACGA GCGGCGCCAG
ATCGAATCCA TCAAGGAACA GCAGACCCAG CTGCTGCTGC AAACCAAAAA GGAACTGGCC
GCCATGCCGC CGCCCGACCT GAGCGTGCCG TCGCACCTGC GCGCGCAGAC CGAGCAGGAG
GAAAGGCGCA AGCAGCTCAT CAAGCTGCTG GCCGAGATTG AACGGCGCAT CAACGAAGAC
GGCGAACAGC CCGCCAGGCG CTACATCAGC CCGTCCACGC GCGAAGAGGT GTATGCGGTG
TATTACGATG CGATGCGCCG CAAGATCGAG AAAAAGGGAA CGCTGAACTT TCCGCAGATG
GCCGGCAAGA AGCTGTATGG CGAGTTGACC ATGACGATGA CGGTCAATGC CGACGGCAAC
GTGCTGGCGA CCGAGGTGGT GCAAAGCTCG GGCAACCCGA CGCTTGACCG CTGGGCGCAA
AGCCTGGTGC AGGGCGCCGG CCCGTTTGAG CCGTTCAGCG AGGCCATGCG CGGCAAGGCC
GACCAGATCG TGGTGGTGTC CAGCTTCAAC TTCGGACGCG ATGACAGCCT GGAAACCAAG
CTCACCCACC GCTGA
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| Protein sequence | MSTAAARHRP VKPKPRPSLV KSPSTLQIAL GVSLAAHAAL LAVRFVDPER FNRVFQDTPL
EVILVNTKST ETPDEHAKAI AQASLAGGGE LEKGRATSPL PPALVMKTGD AQEDENERRQ
IESIKEQQTQ LLLQTKKELA AMPPPDLSVP SHLRAQTEQE ERRKQLIKLL AEIERRINED
GEQPARRYIS PSTREEVYAV YYDAMRRKIE KKGTLNFPQM AGKKLYGELT MTMTVNADGN
VLATEVVQSS GNPTLDRWAQ SLVQGAGPFE PFSEAMRGKA DQIVVVSSFN FGRDDSLETK
LTHR
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