Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3399 |
Symbol | |
ID | 4689577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3604781 |
End bp | 3606307 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639836413 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_983617 |
Protein GI | 121606288 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.11018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.700717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAC TCAATTCCGC CGCCGCCTCC GTTCGCCAAA CCAATGTCTC CGGGCGTCCG CCGGCCCGGC CCACCAAGGA TTCCACCGCC GGGCGGCTGG CGATTGCGCA AAAGCTGCTG CTGGCGCCCT TCGGCCTGGA CGAAGCCGCC TTGAGCCGGG CGCTGGGCGA GATCACTTCC TATGGCGTGG ACGATGCCGA CCTGTATTTC CAGTACACCC GCAGCGAAGG CTGGAGCCTG GAAGAAGGCA TCGTCAAGAC CGGCTCCTTC AGCATCGACC AGGGCGTCGG CGTTCGCGCC GTGAGCGGCG AGAAAACCGC CTTTGCCTAT TCCGACGATA TTTCCGAAGC CTCGCTGCTC GATGCGGCGC GCACCGTGCG CAGCATCTCG GCCGCCGCCA AGTCCGGGCG CGTCAAGACG CCGGCCCGCA AGGTGGCCAG CAGCCGCTCG CTCTACCGCG ACCTGGACCC GATTGCCACG CTGGACAGCA CCGCCAAGGT CGAGCTGCTA GGCAAGGTTG AAAAGCTCGC CAAGGCCAAA GACCCGCGCA TCGTGCAGGT CATGGCCGGA CTGGCCAGCG AATACGACGT GGTGATGGTG GCGCGCGCCG ACGGCACGCT GGCCGCCGAT GTGCGCCCGC TGGTGCGCCT GAGCGTGACC GTGATCGCCG AGCAAAAAGG CCGGCGCGAA GTGGGCTCCA GCGGCGGTGG CGGCCGTTTT GGCCTGGCCT ATTTTGACGA CACGCAAATT GCCCAGTACG TCGATGCGGC CGTGAATGCC GCGCTGACCA ACCTGGACGC GCGCCCCGCG CCGGCCGGCC AGATGACCGT GGTGCTGGGC TCCGGCTGGC CCGGCATCCT GCTGCACGAG GCCATTGGCC ACGGGCTGGA AGGCGACTTC AACCGCAAGG GCTCCAGTGC GTTTTCGGGT CGCATCGGCG AGCGCGTGGC CGCCAAGGGC GTGACGGTGC TCGACGACGG CACGATTGCC GACCGCCGGG GCTCGCTCAA CATCGACGAC GAGGGCAATG TCAGCCAGCG CAATGTGCTG ATCGAAGACG GCATCCTGAA GGGCTACATC CAGGATTCGA TGAATGCGCG CCTGATGAAT GTCAAGCCCA CCGGCAACGG CCGGCGCGAA AGCTATGCCC ATGTGCCGAT GCCGCGCATG ACCAACACCT ACATGCTGGG CGGCGACAAG GCGCCCGAGG AAATCATCGC CAGCATCAAG AAAGGCCTGT ACGCCAGCAA CTTTGCCGGC GGCCAGGTGG ACATCACCTC GGGCAAGTTC GTGTTCTCGG CCAGCGAAGC GTTCTGGGTT GAAAACGGCA AGATTCTTTA TCCGGTCAAG GGCGCGACGA TTGTCGGCAA CGGCCCCGAT GCGCTGACCC GCGTCACCAT GATCGGCAAC GACATGAAGC TCGACAGCGG CGTCGGCACC TGCGGCAAGG AAGGCCAGAG CGTGCCGGTC GGCGTCGGCC AGCCGACGCT GCGCATTGAC GGGCTGACCG TGGGCGGCAC CGCCTGA
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Protein sequence | MTSLNSAAAS VRQTNVSGRP PARPTKDSTA GRLAIAQKLL LAPFGLDEAA LSRALGEITS YGVDDADLYF QYTRSEGWSL EEGIVKTGSF SIDQGVGVRA VSGEKTAFAY SDDISEASLL DAARTVRSIS AAAKSGRVKT PARKVASSRS LYRDLDPIAT LDSTAKVELL GKVEKLAKAK DPRIVQVMAG LASEYDVVMV ARADGTLAAD VRPLVRLSVT VIAEQKGRRE VGSSGGGGRF GLAYFDDTQI AQYVDAAVNA ALTNLDARPA PAGQMTVVLG SGWPGILLHE AIGHGLEGDF NRKGSSAFSG RIGERVAAKG VTVLDDGTIA DRRGSLNIDD EGNVSQRNVL IEDGILKGYI QDSMNARLMN VKPTGNGRRE SYAHVPMPRM TNTYMLGGDK APEEIIASIK KGLYASNFAG GQVDITSGKF VFSASEAFWV ENGKILYPVK GATIVGNGPD ALTRVTMIGN DMKLDSGVGT CGKEGQSVPV GVGQPTLRID GLTVGGTA
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