| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3398 |
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| Symbol | |
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| ID | 4686280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3603412 |
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| End bp | 3604533 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836412 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_983616 |
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| Protein GI | 121606287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.677013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA AAGCCACCCC CGCCAGCCCA AGCTGGTATG CGGACGTCGA AAAAACCAGC
CAGACCGACG ACAAACGCAT CAAGGACATC ACCGTGCTAC CCCCTCCCGA GCATCTCATC
CGCTTTTTCC CGATCAACGG CACCGCCGTC GAATCGCTGA TCACCCAGAC GCGCCAGAAC
ATCCACAACA TCATGGCCGG CACCGACGAC CGCCTGCTGG TGGTGATTGG CCCGTGCTCG
ATCCACGACC CGATGGCCGC GCTCGACTAT GCCCGCCGCC TGGCCGAGCA GCGCAAGAAA
TACGCCGGAA CGCTGGAAAT CGTGATGCGG GTGTACTTTG AAAAGCCGCG CACCACCGTC
GGCTGGAAAG GCTTGATCAA CGACCCGTAC CTCGATGAAA CCTTCCGCAT CGACGAGGGC
CTGCGCATTG CCCGCCAGCT GCTGATCGAC ATCAACCGCC TGGACGTGCC GGCCGGCAGC
GAGTTCCTGG ACGTGATCTC CCCGCAGTAC ATCGGCGACC TGATTTCCTG GGGCGCGATT
GGCGCGCGCA CCACCGAAAG CCAGGTGCAC CGCGAACTGG CTTCGGGCCT GTCGGCGCCA
ATTGGCTTCA AGAACGGCAC CGACGGCAAC ATCCGCATCG CCACCGATGC CATCCAGGCG
GCGGCGCGCG GCCACCATTT CCTGTCGGTC CACAAAAACG GCCAGGTCGC GATTGTGCAA
ACCCAGGGCA ACAAGGACTG CCACGTCATC CTGCGCGGCG GCAAGGCGCC CAACTATGAC
GCCGCCAGCG TGAGCGCTGC CTGCAAGGAA CTGCATGCCG CAGGCCTGCC GGCCACCTTG
ATGGTCGATT GCAGCCATGC CAACAGTTCC AAAAAGCACG AAAGGCAGAT GGACGTGGCG
CGCGACATTG CCGCCCAGAT CGCCGATGGC TCACGCAATG TGTTTGGCCT GATGGTTGAA
AGCCACCTGA AGGCCGGCGC GCAAAAGTTC ACGGCCGGCA AGGACGATGC CCGGGCGCTC
GAATATGGCC AGAGCATCAC CGACGCCTGC CTGGGCTGGG ACGACTCGCT GGCCATGCTG
GAGTCGCTGT CAGCCGCCGT AGAGGCTCGT CGGGCAAAAT AA
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| Protein sequence | MNAKATPASP SWYADVEKTS QTDDKRIKDI TVLPPPEHLI RFFPINGTAV ESLITQTRQN
IHNIMAGTDD RLLVVIGPCS IHDPMAALDY ARRLAEQRKK YAGTLEIVMR VYFEKPRTTV
GWKGLINDPY LDETFRIDEG LRIARQLLID INRLDVPAGS EFLDVISPQY IGDLISWGAI
GARTTESQVH RELASGLSAP IGFKNGTDGN IRIATDAIQA AARGHHFLSV HKNGQVAIVQ
TQGNKDCHVI LRGGKAPNYD AASVSAACKE LHAAGLPATL MVDCSHANSS KKHERQMDVA
RDIAAQIADG SRNVFGLMVE SHLKAGAQKF TAGKDDARAL EYGQSITDAC LGWDDSLAML
ESLSAAVEAR RAK
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