Gene Pnap_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3386 
Symbol 
ID4689029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3591482 
End bp3592645 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content60% 
IMG OID639836400 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_983604 
Protein GI121606275 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCT GGGACGAAGA AGTCACACCA TCGTTGCAGA CCCCCCTCCC CAGCGACCTG 
CCAGCCAGCC GCTCAGCGGA CCTCCCGACG CCCTCTTTCA TGGCCTCCGC GCCACCGCTG
GATACCCACG AAATCCCTGC CAAAGCCAAG CGCGTCAAGG CCTCCGACAA ACGCATCATC
AACGGCCAGA CCGACGTCAA CCAGCTGGTG CCGTTCAAGT ACAAATGGGC CTGGGAAAAA
TACCTGGCCT CCTGCGCCAA CCACTGGATG CCGCAGGAAG TCAACATGAC GCGCGACATC
GCGCTGTGGA AAGACCCGAA CGGCCTGAGC GACGATGAAC GCCGCCTGGT CATGCGCAAC
CTCGGCTTTT TCGTGACGGC CGATTCACTC GCCGCCAACA ACATCGTGCT AGGCACCTAC
CGCCACATCA CCGCGCCCGA ATGCCGCCAG TTCCTGCTGC GCCAGGCGTT CGAGGAAGCC
ATCCACACCC ATGCCTACCA GTACATCACC GAGTCGCTGG GCCTGGACGA GGGCGAGATC
TTCAACGCCT ACAACGAAGT GCAGTCCATC AAGGACAAGG ACCAGTTCCT GATCCCGTTC
ATTGAAGCGA TTTCCGACCC CGGCTTCAAG ACCGGCACCC TGGAGTCCGA CCAGACCCTG
CTCAAGTCGC TGATCGTGTT TGCCTGCCTG ATGGAAGGCC TGTTCTTCTA TGTCGGTTTC
ACGCAGATCC TGGCGCTGGG CCGGCAAAAC AAGATGACCG GCGCGGCCGA GCAGTACCAG
TACATCCTGC GTGACGAGTC GATGCACTGC AACTTCGGCA TCGACCTGAT CAACCAGCTC
AAGCTCGAAA ACCCGCAGCT CTGGACCGCC GAGTTCAAGG CCGAGATCAA CGCCCTGTTC
ATGAAGGCCG TCGAACTCGA ATACCGCTAC GCCGAGGACA CCATGCCGCG CGGCGTGCTG
GGCCTCAACG CATCCATGTT CAAAGGCTAC TTGCGCTACA TCGCCAATCG CCGCGCCACG
CAGATCGGGT TAGAGACGCT GTTCCCGAAC GAGGAAAACC CGTTCCCGTG GATGAGCGAG
ATGATCGACC TGAAAAAAGA ACGCAACTTC TTTGAAACCC GTGTGATTGA ATACCAGTCT
GGCGGCGCCC TCTCCTGGGA TTGA
 
Protein sequence
MLTWDEEVTP SLQTPLPSDL PASRSADLPT PSFMASAPPL DTHEIPAKAK RVKASDKRII 
NGQTDVNQLV PFKYKWAWEK YLASCANHWM PQEVNMTRDI ALWKDPNGLS DDERRLVMRN
LGFFVTADSL AANNIVLGTY RHITAPECRQ FLLRQAFEEA IHTHAYQYIT ESLGLDEGEI
FNAYNEVQSI KDKDQFLIPF IEAISDPGFK TGTLESDQTL LKSLIVFACL MEGLFFYVGF
TQILALGRQN KMTGAAEQYQ YILRDESMHC NFGIDLINQL KLENPQLWTA EFKAEINALF
MKAVELEYRY AEDTMPRGVL GLNASMFKGY LRYIANRRAT QIGLETLFPN EENPFPWMSE
MIDLKKERNF FETRVIEYQS GGALSWD