| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3385 |
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| Symbol | |
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| ID | 4690010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3588421 |
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| End bp | 3591324 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639836399 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_983603 |
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| Protein GI | 121606274 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG CACCTTATGC CGTGCCCCTT TCATCCGGCG TTCCGGCCAG CAATTCAATT
CACGCCACGC CGGCATCCGG CGCGCTGGCC AACTACCAGA TCATTCGCCG CAACGGCTCC
GTCGTTGCAT TCGAGCCCAG CAAGATTGCC GTCGCCATGA TGAAGGCTTT CCTGGCCGTG
CACGGCACCC AGGGCGCGGC CTCGGCCAGC GTGCGCGAAA CCGTCGATAC CCTGACCCAG
GCCGTCGTTC GCGCCCTGAT GCGTTCACGC CCCAGCGGCG GCACCTTCCA CATCGAGGAT
GTGCAGGACC AGGTTGAACT CGGCCTGATG CGCGGCGGTC ACCACGAAAT CGCCCGGGCC
TACGTGCTGT ACCGCGAAAA GCACAACCAG GAACGCGCCC GGCAGCTGCA GGCCCAGACG
CCTGCCCTGC CGCAGCTTCA TGTCATGGAC GGCGGCAAAC GGGTTGCGCT GGATCTCCGC
AACCTGCAGG CGCTGATCGA GGCCTCATGC GCCAACCTCG GCACCGATGT CAAGCCCGAC
CCGATTGTTT CGGAAACCAT GCGCAACCTG TACGACGGCG TGCCCATCGA AGAGGTTTAC
AAGGCGTCCA TCCTGGCAGC CCGCACGCTG ATCGAAAAAG ACCCCGACTA CACCTACGCC
ACCGCGCGCC TCTTGCTGCA CACCATCCGC AAGGAAGTCC TGGACGAGGA AATCAGCCAC
GAAGCCATGG CTGTCCGCTA TGTCACGTAT TTCCCTGAAT TCATCGCCAA GGGCATCAAA
AACGAGCTGC TCGACGAAAA ACTCCAGCAG TTCGACCTGG CCCGCCTGGG TGCGGCGCTC
AAGCCCGAGC GCGACCTGCA GTTCGACTAC CTCGGCCTGC AGACGCTGTT CGACCGCTAC
TTCTTGCACA TCCGCAAGCA GCGCATCGAG TTGCCGCAGG CGTTCTTCAT GCGCGTGGCC
ATGGGCCTGT CGCTGAACGA AACCGACCGC GAAGCACGCG CCATCGAGTT CTACGAAATC
CTGTCGTCGT TCGACTTCAT GTCGAGCACG CCGACGCTCT TCAATGCCGG CACCCTGCGC
TCGCAGCTGT CGTCCTGCTA CCTCACGACG GTTGCCGACG ACCTGGGCGG CATCTACGAC
GCCATCAAGG AAAACGCCCT GCTGTCCAAG TTTGCCGGAG GCCTGGGCAA TGACTGGACG
CCAGTGCGCG CCATGGGCGC GCACATCAAG GGCACCAACG GCGAATCGCA AGGCGTGGTG
CCCTTCCTGA AGGTGGTGAA TGACACGGCT GTAGCGGTAA ATCAAGGTGG AAAACGCAAG
GGCGCCGTCT GCGCCTACCT CGAAACCTGG CACCTGGACA TCGAGGAATT CCTGGAGCTG
CGCAAAAACA CCGGCGACGA CCGCCGCCGC ACGCACGACA TGAACACGTC GAACTGGATT
CCCGACCTGT TCATGCGCCG CGTGATGGAA AAAGGCAGCT GGACGCTGTT CTCGCCGTCC
GACACGCCCG ACCTGCACGA CAAGTTCGGC CAGGACTTTG AAAAGGCCTA CGTCGCCTAT
GAAGCGCGCG CCGAGCGCGG CGAACTCAAG CCCTCGCGCA AACTGCAGGC CACCGACATG
TGGCGCAAGA TGCTGTCGAT GCTGTTTGAA ACCGGCCACC CCTGGATCAC GTTCAAGGAT
GCCTGCAACA TCCGCTCGCC GCAGCAGCAT GCCGGCGTGG TGCATTCGTC CAACTTGTGT
ACCGAAATTA CCCTGAATAC CAGCGCGACC GAAACGGCCG TCTGCAACCT CGGCTCGATC
AACCTGGTCC AGCATCTGAA GGATGGCGCG CTCGACCACG ACAAGCTGAA GAAAACCATC
ACCACGGCCA TGCGCATGCT GGACAACGTG ATCGACATCA ACTACTACGC CGTGGAAAAG
GCACGCCACT CCAACATGCG GCATCGCCCG GTCGGCTTGG GGCTGATGGG CTTCCAGGAC
TGCCTGTACG AACTGCGCGT GCCTTACGCA TCGCAGGCCG CCGTTGAATT CGCCGACACC
TCGATGGAAG CGATCTGCTA CCACGCTTAC TGGGCCTCCA CCGAACTGGC CAGGGAACGC
GGCCAGTACG AAAGCTACAA AGGCTCGCTC TGGGACCAGG GCATCCTGCC GCTCGACACG
CTGGACATGC TGGCCAAGGA GCGCGGCGGC TATGTCGAAG TGGACCGTTC CGCGACGCTC
GACTGGGACG CCCTGCGCCA GAAAATCGCC ACGGACGGCA TGCGCAACTC CAACTGCGTG
GCGATTGCCC CGACCGCGAC TATTTCCAAC ATCATCGGCG TCGATGCCTG CATCGAGCCC
TGCTTTGGCA ACCTGTCGGT CAAATCCAAC CTGTCGGGCG AATTCACCGT AATCAACCAC
TACCTGGTGC GCGATCTGAA AAAGCTCGGC CTGTGGGACG ATGTGATGGT CGTTGACCTG
AAGCATTTCG ACGGCTCGCT GCGCCCCATC GACCGGGTTC CGAATGATAT CAAGGCGCTG
TATGCAACGG CGTTTGAAAT CGAAACCTCG TGGCTGGTCG AAGCCGGATC GCGCCGCCAG
AAATGGATAG ACCAGGCGCA GTCGCTGAAC ATCTACATGG CCGGCGCGTC GGGCAAGAAG
CTCGACGAGA CCTACAAGCT GGCCTGGGTA CGCGGCCTGA AAACCACCTA TTACCTGCGC
ACCCAGAGCG CCACGCACGC CGAAAAATCA ACCGTTCAGG CGGGCAAGAT GAACTCGGTG
TCGTCCGCTC CTGCAGCAGC CATGTTGGGC ATGAGCGCGA TTGACAAGGC CGCCGCTGCA
GCGCAGGCCC AGATGAGCGC AACGCCCGCG ACCGACATCA AATTTTGCGC GATTGACGAT
CCGGGTTGCG AGGCTTGCCA ATAA
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| Protein sequence | MQTAPYAVPL SSGVPASNSI HATPASGALA NYQIIRRNGS VVAFEPSKIA VAMMKAFLAV
HGTQGAASAS VRETVDTLTQ AVVRALMRSR PSGGTFHIED VQDQVELGLM RGGHHEIARA
YVLYREKHNQ ERARQLQAQT PALPQLHVMD GGKRVALDLR NLQALIEASC ANLGTDVKPD
PIVSETMRNL YDGVPIEEVY KASILAARTL IEKDPDYTYA TARLLLHTIR KEVLDEEISH
EAMAVRYVTY FPEFIAKGIK NELLDEKLQQ FDLARLGAAL KPERDLQFDY LGLQTLFDRY
FLHIRKQRIE LPQAFFMRVA MGLSLNETDR EARAIEFYEI LSSFDFMSST PTLFNAGTLR
SQLSSCYLTT VADDLGGIYD AIKENALLSK FAGGLGNDWT PVRAMGAHIK GTNGESQGVV
PFLKVVNDTA VAVNQGGKRK GAVCAYLETW HLDIEEFLEL RKNTGDDRRR THDMNTSNWI
PDLFMRRVME KGSWTLFSPS DTPDLHDKFG QDFEKAYVAY EARAERGELK PSRKLQATDM
WRKMLSMLFE TGHPWITFKD ACNIRSPQQH AGVVHSSNLC TEITLNTSAT ETAVCNLGSI
NLVQHLKDGA LDHDKLKKTI TTAMRMLDNV IDINYYAVEK ARHSNMRHRP VGLGLMGFQD
CLYELRVPYA SQAAVEFADT SMEAICYHAY WASTELARER GQYESYKGSL WDQGILPLDT
LDMLAKERGG YVEVDRSATL DWDALRQKIA TDGMRNSNCV AIAPTATISN IIGVDACIEP
CFGNLSVKSN LSGEFTVINH YLVRDLKKLG LWDDVMVVDL KHFDGSLRPI DRVPNDIKAL
YATAFEIETS WLVEAGSRRQ KWIDQAQSLN IYMAGASGKK LDETYKLAWV RGLKTTYYLR
TQSATHAEKS TVQAGKMNSV SSAPAAAMLG MSAIDKAAAA AQAQMSATPA TDIKFCAIDD
PGCEACQ
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