| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3379 |
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| Symbol | |
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| ID | 4689398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3581797 |
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| End bp | 3583155 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836393 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_983597 |
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| Protein GI | 121606268 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAG CCCTTACCGA CAAGTTATCC CGCCTCGTCA AGGAAATGCG CGGCCAGGCC
CGCATCACCG AATCCAATGT GCAGGACATG CTGCGCGAAG TCCGCATGGC GCTGCTGGAG
GCCGACGTGG CCCTGCCGGT GGTGCGCGAC TTCATTGCCC GCGTCAAGGA AAAAGCGCTG
GGCCAGGAGG TGATGGGCTC GCTCTCGCCG GGCCAGGCGC TGGTCGGCAT TGTCAGCAAG
GAACTGGCCG CCACCATGGG CGAGGGCGTG AGCGACATCA ACCTGGCCGC GCAGCCGCCC
GCCGTCATCC TGATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACGACCAC CGCCAAGCTG
GCCAAGCACC TGATTGAAAA GCGCAAGAAA AAGGTTCTGA CGGTTTCTGG CGACGTGTAC
CGGCCGGCCG CCATCGAGCA GCTCAAGGTC GTCACGAAGC AGGCCGGGGC CGAATGGTTT
CCGAGCACGC CCGACCAGAA GCCGGCCGAC ATCGCCCGCG CCGCGCTCGA CTACGCCAAG
CGGCATTTCT TCGACGTGCT GCTGGTCGAT ACCGCCGGCC GGCTGGCGAT TGACGAAGCC
TTGATGAATG AAATCAAGGA ACTGCACGCC ATCCTCAAGC CGATTGAGAC GCTGTTCGTG
GTCGATGCCA TGCAGGGCCA GGATGCGGTC AACACGGCCA AGGCCTTCAA GGAAGCGCTG
CCGCTGACCG GCATCATCCT GACCAAGACC GATGGCGACT CGCGCGGCGG CGCGGCGCTG
TCGGTGCGCC AGATCACCGG CGCGCCGATC AAGTTCTCGG GCACCAGCGA AAAACTCGAC
GGTCTGGAGG TGTTTGACGC CGAGCGCCAT GCCGGCCGCA TCCTGGGCAT GGGCGACATC
GTCGCGCTGG TCGAGCAGAT GGCGTCGGGC GTGAACATGG CCGAGGCGCA AAAGCTCGCC
GCCAAGATCA AGTCCGGCGA CGGCTTTGAC CTCAACGATT TTCTGAGCCA GCTGCAGCAG
ATGAAGAGCA TGGGGGGCCT GTCCAGCCTG CTCGACAAGC TGCCAACGCA AATGGCCGCC
AAGGCCGGCT CCATCGACAT GGACAAGGCC GAAAAAGACA TGAAGCGCAA GGAGGGCATC
ATTTTGAGCA TGACGCCGCT GGAGCGGCGC AAGCCCGAAC TCATCAAGGC GACGCGCAAG
CGCCGCATCG CCGCCGGCTC GGGCGTGCAT GTTCAGGAGG TCAACCGCCT GCTGAATGAA
TTTGAGCAGA TGCAGGGCAT GATGAAAAAG ATGAAGGGCA GCGGCATGAT GAAGATGATG
AAGCGCATGG GCGGCATGAA GGGGATGCCG AAGTTCTGA
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| Protein sequence | MATALTDKLS RLVKEMRGQA RITESNVQDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQEVMGSLSP GQALVGIVSK ELAATMGEGV SDINLAAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKV VTKQAGAEWF PSTPDQKPAD IARAALDYAK
RHFFDVLLVD TAGRLAIDEA LMNEIKELHA ILKPIETLFV VDAMQGQDAV NTAKAFKEAL
PLTGIILTKT DGDSRGGAAL SVRQITGAPI KFSGTSEKLD GLEVFDAERH AGRILGMGDI
VALVEQMASG VNMAEAQKLA AKIKSGDGFD LNDFLSQLQQ MKSMGGLSSL LDKLPTQMAA
KAGSIDMDKA EKDMKRKEGI ILSMTPLERR KPELIKATRK RRIAAGSGVH VQEVNRLLNE
FEQMQGMMKK MKGSGMMKMM KRMGGMKGMP KF
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