| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3373 |
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| Symbol | |
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| ID | 4689739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3573055 |
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| End bp | 3574398 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836387 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_983591 |
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| Protein GI | 121606262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA AAGTCTTTAT CAAAACCTTC GGCTGCCAGA TGAACGAGTA CGACTCGGAC
AAGATGAGCG ACGTGCTGCA TGCCGCCGAG GGCTACGAGA ACACGCAAAA CATCGACGAA
GCCGACCTGA TTTTGTTCAA CACCTGCTCG GTGCGCGAAA AGGCGCAGGA AAAGGTCTTC
AGCGACCTGG GCCGTGTCAA GCATTTGAAG GCCAAGGGCG TGCTGATCGG CGTCGGCGGC
TGCGTCGCCA GCCAGGAAGG CGAGGCCATC ATCCAGCGCG CGCCGTATGT CGATGTGGTC
TTCGGCCCGC AGACGCTGCA CCGCCTGCCG CAGCTGCTGG CCAGCCGCGC CCGGCTCGGC
AAACCGCAGG TCGATATCAG CTTTCCCGAG ATCGAGAAGT TCGACCACCT GCCGCCGGCG
CGCGTCGAGG GCGCCAGCGC TTTCGTCAGC ATCATGGAAG GCTGCTCCAA GTACTGCAGC
TACTGCGTCG TGCCCTACAC GCGCGGCGAG GAAGTCTCGC GGCCGTTCGA GGACGTGCTC
GTCGAAGTCG CCGGGCTGGC CGACCAGGGC GTCAAGGAAG TCACGCTGCT GGGCCAGAAC
GTCAACGCCT ATCGCGGGAG CATGGGCGGC ACGGCCGAAA TCGCCGACTT TGCGACGCTG
CTCGAATATG TCTCCGAGAT TCCCGGAATC GAGCGCATCC GCTACATCAC CAGCCACCCG
AACGAATTCA CCCAGCGCCT GATCGATGCC TACGCCACAT TGCCCAAGCT GGTCAACCAC
CTGCATTTGC CGGTGCAGCA CGGCTCGGAC CGCATCCTGA TGGCGATGAA GCGCGGCTAC
ACCGCCATGG AATACAAGAG CACCATCCGC AAGCTGCGCG CCATCCGGCC CGACCTGGCG
ATGAGCAGCG ACTTCATCGT CGGCTTTCCG GGCGAGACCG AGGACGATTT TGAAAAGCTG
ATGAAGCTGG TGAACGATGT CGGCTACGAC ACCTCGTTCA GCTTCATCTT CAGCCCGCGC
CCCGGCACAC CGGCCGCCAA CCTGGCCGAC GACACGCCGC ACGAGGTCAA GCTCAAGCGC
CTGCAGCACC TGCAGGCGAC GCTCGACGAC AGCGTGCGCG CCATCAGCGC CAGCCGGCTC
GGCACGGTTC AGCGCATCCT CGTCGAAGGC ACGGCGCGCA AGGACGCCAG CGAGCTGATG
GGCCGCACCG AATGCAACCG GGTCGTGATT TTGAAAGGCC AGCCGCGCCT GATCGGCCAG
ATGGTCGATG TGCGCATTAC CGAGGCCAGC CAGCGCTCGC TGCGCGGCGA AGTCCTGACG
CAGGACGACA CGGTTGCGGC CTAA
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| Protein sequence | MPKKVFIKTF GCQMNEYDSD KMSDVLHAAE GYENTQNIDE ADLILFNTCS VREKAQEKVF
SDLGRVKHLK AKGVLIGVGG CVASQEGEAI IQRAPYVDVV FGPQTLHRLP QLLASRARLG
KPQVDISFPE IEKFDHLPPA RVEGASAFVS IMEGCSKYCS YCVVPYTRGE EVSRPFEDVL
VEVAGLADQG VKEVTLLGQN VNAYRGSMGG TAEIADFATL LEYVSEIPGI ERIRYITSHP
NEFTQRLIDA YATLPKLVNH LHLPVQHGSD RILMAMKRGY TAMEYKSTIR KLRAIRPDLA
MSSDFIVGFP GETEDDFEKL MKLVNDVGYD TSFSFIFSPR PGTPAANLAD DTPHEVKLKR
LQHLQATLDD SVRAISASRL GTVQRILVEG TARKDASELM GRTECNRVVI LKGQPRLIGQ
MVDVRITEAS QRSLRGEVLT QDDTVAA
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