| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3370 |
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| Symbol | |
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| ID | 4689437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3571070 |
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| End bp | 3571687 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836384 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_983588 |
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| Protein GI | 121606259 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.339431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCACG GCGAGCGCTT CAACAGCATC AGCCACCTGA TTGGCGCAGC GCTGGCGCTG
GCCGGTTCGG CGGTGCTGAT CGTGCTGGCG GCCCGCCTGG GCGACCCGTG GAAAATCGTC
AGCTTCAGCA TCTACGGCGC CATGCTGGTG ACGCTGTATG TGTTTTCGAC GCTCTACCAC
AGCGTGCGCG GGCCGGCCAA GAACGTGCTG CGCAAATTCG ACCACTGCTC GATTTACCTC
TTGATTGCCG GCACCTACAC GCCGTTTGCG CTGGTGTCGC TGCGCGGCAT CTGGGGCTGG
TGGATTTTTG GCGTGATCTG GGGGCTGGCA GTGGTCGGCA TCGTGCAGGA AGTCTGGCTG
GCCAAAGGCG CGCGCGTCGC CTCACTGATC ATTTATATAC TCATGGGATG GCTTGCCATG
GTGGCGGTGT TGCCGCTGTG GCATGCTCTG ACACCTGCAG GCTTTGCCTG GCTGGCGGCG
GGCGGTGCCT GTTATACGCT GGGCATTGCT TTTTATGCCA CCGACCATAA AGTTCGCCAC
GGCCATGGCC TGTGGCACCT GTTTGTGCTT GGCGGCAGCA TCTGCCATTT CTTCACCGTG
CTGCTTTATG TGGCCTGA
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| Protein sequence | MYHGERFNSI SHLIGAALAL AGSAVLIVLA ARLGDPWKIV SFSIYGAMLV TLYVFSTLYH
SVRGPAKNVL RKFDHCSIYL LIAGTYTPFA LVSLRGIWGW WIFGVIWGLA VVGIVQEVWL
AKGARVASLI IYILMGWLAM VAVLPLWHAL TPAGFAWLAA GGACYTLGIA FYATDHKVRH
GHGLWHLFVL GGSICHFFTV LLYVA
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