Gene Pnap_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3369 
Symbol 
ID4689916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3569980 
End bp3570768 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID639836382 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_983587 
Protein GI121606258 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.186723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATG AACTGATTGT GACTTCTACC GAAGGCCCGG ATTCGCGCCA GGTGGGCATC 
GTGACGCTGA ACCGGCCCAA GCAGCTCAAT GCGCTGAACA ACGAGCTGAT GGACGAGCTG
GGCAGCGCGC TGAAAGCCTT TGACGCCGAC GACAGCATCG GCTGCATCAT CCTGACCGGC
AGCGAAAAAG CCTTTGCCGC CGGCGCCGAC ATCGGCGCCA TGGCGAACTA CAGCTTTGCC
GATGTCTATA ACAACGACTA CATCACGCGC AACTGGGAAC AGATCCGCTC AATCCGCAAG
CCGGTGATCG CGGCCGTCAG CGGTTTTGCG CTGGGCGGCG GCTGCGAACT GGCGATGATG
TGCGACTTCA TCATCGCCGC CGACAACGCC AGGTTCGGCC AGCCCGAGAT CAAGCTGGGC
ATCATTCCGG GCGCCGGCGG AACGCAGCGC CTGCCCAGAG CCGTCGGCAA GGCCAAGGCC
ATGGACCTGG CGCTGACCGG CCGCATGATG GATGCCGTCG AGGCCGAACG CGCCGGGCTG
GTCAGCCGCG TGGTGCCGCT GGACAAGCTG ATGGACGAGG CGCTGGGCGC GGCATTGATG
ATCTGCAGCT ACGGCCAGCC CAGCGTGTTC GCGGCCAAGG AAGCGGTCAA CCGCGCCTTT
GAAAGCAGCC TGAGCGACGG CGTGATGTTC GAGCGGCGCC TGTTCCACGC GCTGTTCGCC
ACCGAAGACC AGAAGGAAGG CATGGACGCC TTCGTCAACA AACGCAAGCC CGAGTTCAAG
AATCGCTGA
 
Protein sequence
MTYELIVTST EGPDSRQVGI VTLNRPKQLN ALNNELMDEL GSALKAFDAD DSIGCIILTG 
SEKAFAAGAD IGAMANYSFA DVYNNDYITR NWEQIRSIRK PVIAAVSGFA LGGGCELAMM
CDFIIAADNA RFGQPEIKLG IIPGAGGTQR LPRAVGKAKA MDLALTGRMM DAVEAERAGL
VSRVVPLDKL MDEALGAALM ICSYGQPSVF AAKEAVNRAF ESSLSDGVMF ERRLFHALFA
TEDQKEGMDA FVNKRKPEFK NR