| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3368 |
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| Symbol | |
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| ID | 4689901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3568092 |
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| End bp | 3569894 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836381 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_983586 |
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| Protein GI | 121606257 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.428064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCT CTACCCGAAA CACCCCTGCC CCGCTTCATT ACCGCGTCGA GGTGGGCAAC
CTGCATGCCC ACCTGTTTCG CGTCACGCTG ACGATTGCCA AACCGGCGGC GCTGCAGCGG
GTGTCGCTGC CGGTGTGGAT ACCGGGCAGC TACCTGGTGC GCGAGTTTTC AAAAAACCTG
CAGGGCCTGC AGGCGCATCA GGGCAGCCGC AGCCCGGCGC CGCTGGCCGT GGAGCAGCTC
GACAAATGCA GCTGGCAGAT CGCCTGCTCG CCTGCCAGCG CGCTGGTGCT GCGCTACGAG
GTCTATGCCC ACGACAATTC GGTGCGCACC GCCTGGCTGG ATGCGAGCCG GGGGTTTTTC
AACGGCACCA GCTTGTGCCT CAAGGTCGAG GGCCAGGAGG CTTTGGCGCA TGTGCTGGAA
CTGCCTGCCT CCAAAGCCAT GAGCGGATGG TCGGTCGCCA CCGGCCTGGC GCCGCAAAAA
ATCGACGGCC AGGGTTTTGG CTGCTATGTG GCGGCCGATT ACGACGAACT GGTTGATGCC
CCGGTCGAAA TGGGGCCGTT CTGGAGCGGC AGCTTCACCG CGCGTGGCGT GCCGCACCGT
TTTGTCGTGG CGGGCGCGGC GGCGGCCAGC TTTGACGGCG CGCGGCTGCT GGCCGACACG
CAGAAGATCT GCGAGACCGA AATCCGCTTC TGGCACGGCA GCAAGAAGCC GCCCTTCACA
AATTACCTGT TCATGCTCAA CGCCGTGGAC GACGGCTACG GCGGGCTGGA GCACCGCAAC
TCGACCGCGC TGATCTGCAC CCGAAAAGAC CTGCCGCGCC AGGGCGACGC CAAGGTGTCC
GACGGCTACA CCACCTTGAG GGGCCTGATC AGCCACGAGT ATTTCCACAC CTGGAACGTC
AAGCGCCTGC GCCCGGCGGA GTTTGAAAGC TATCGCCATG ACCGCGAGAA CTACACCGAA
CTGCTGTGGT TTTTTGAAGG TTTCACCAGC TATTACGACG ACCTGCTGCT GCGCCGCGCC
GGGCTGCTGG ACAACGCCGG CTACCTGAAG CTGCTGACCA CCGCCATCAA CCAGGTCTTG
CAGGCGCCCG GGCGGCTGGT GCAGTCGGTG GCCGAGGCGA GTTTCGACGC CTGGGTCAAG
TTCTACCGGC CCGATGAAAA CACGCCCAAC GCGACCATCA GCTACTACGC CAAGGGCGCG
CTGGTGGCGC TGTGCCTGGA CCTGACGCTG CGCAGCGAAG GCCGCACCAC GCACGGCGCC
ACGCTCGACG ATGCGATGCG CGCACTCTGG AAGCGCTGCA AGGCCGGGGC CATGCGCGAG
CTTGACGTGG CCGCCGTGCT GGAAACGCTG GGCCTGCGCT CGTTTGCGCC CGAACTGGCC
GCCTGGGTGC ATGGGCGCGG CGAGTTGCCG CTGAAGGAAT TGCTGGAGCA GCACGGCGTG
GCGGTGCTCG AAGAGCCCGC GCAACTGGCG CAGCGGCTGG GCCTTCGGGT GGCTGAAAAC
CACAGCGTCC AGATCAAGAC CGTGCTGCGC GGCACAGCGG CCGAGCAGGC CGGCTTTTCG
GCCGGCGACG AATGGCTGGG GCTGGAGTCG GCCGGCAAGC CGCAGGCTGA CACGGGCTGG
CGCATGAGCC GGCTCGATGA CCTGACGCTT TACGCCGGGG ATGCGAAAAA GGTCATCGCA
CTGGTGTCGC GCGACAAGCG GCTGGTGCGG CTTGAACTGA CCCTGCCGCC GCCACTGACG
ACCTGGCGGC TGGCGGTCAA GAACGAGGCG CGCATCAACG AGTGGCTGGA GTCCAAAGCC
TGA
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| Protein sequence | MATSTRNTPA PLHYRVEVGN LHAHLFRVTL TIAKPAALQR VSLPVWIPGS YLVREFSKNL
QGLQAHQGSR SPAPLAVEQL DKCSWQIACS PASALVLRYE VYAHDNSVRT AWLDASRGFF
NGTSLCLKVE GQEALAHVLE LPASKAMSGW SVATGLAPQK IDGQGFGCYV AADYDELVDA
PVEMGPFWSG SFTARGVPHR FVVAGAAAAS FDGARLLADT QKICETEIRF WHGSKKPPFT
NYLFMLNAVD DGYGGLEHRN STALICTRKD LPRQGDAKVS DGYTTLRGLI SHEYFHTWNV
KRLRPAEFES YRHDRENYTE LLWFFEGFTS YYDDLLLRRA GLLDNAGYLK LLTTAINQVL
QAPGRLVQSV AEASFDAWVK FYRPDENTPN ATISYYAKGA LVALCLDLTL RSEGRTTHGA
TLDDAMRALW KRCKAGAMRE LDVAAVLETL GLRSFAPELA AWVHGRGELP LKELLEQHGV
AVLEEPAQLA QRLGLRVAEN HSVQIKTVLR GTAAEQAGFS AGDEWLGLES AGKPQADTGW
RMSRLDDLTL YAGDAKKVIA LVSRDKRLVR LELTLPPPLT TWRLAVKNEA RINEWLESKA
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