| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3349 |
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| Symbol | |
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| ID | 4689157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3543643 |
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| End bp | 3545076 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836362 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_983567 |
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| Protein GI | 121606238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.355989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTCA GGCGGGATCT GCGGCTCCAG GACAATGCAG CGCTGCACCA TGCGCTGAAA
TCGTGTGAGC AGGTGTTTTG CGCCTTCGTT TTTGACCGGG CCATTCTGGA TTCGCTGCCA
AAAGCCGACC GTCGGGTCGA GTTCATCCGG GAATCCCTGG TGGACCTGAA CCGTCAATTG
GCAAAACTGG CCTTGCCTGC CGGCCTGCTG ATACGACACG GCACCGCTTT GGACGCCCTG
CCCGCCTTGG CGTCTAGGCT TTCGGTCGAT GCAGTGTTTG CCAACCACGA TGACGAGCCT
TGCAGCCTGG CGCGCGATGC CGAAGTGCAG GGCTTGCTGG AATGCGCAGG CGTGGCTTTT
CACACGTTCA AGGACCATGT CATTTTTGAA CGGCAGGAGG TGCTGACGCT GGCCGGCCAG
CCTTATACCG TCTTCACCCC CTACAAGAAG GCCTGGCTGA AAAAGGTCGA TGCCTTTTAC
CTCCAGCCCT ATCCGGTTGA GAAGTACGCA TCCGCGCTGG CTGCCCGACC GGCAGATGAA
CGGCAGGATG TGCCCGCGCT GGCCGAGCTG GGGTTTGAAA AAACCAACCT GTCAGCGCTC
AGGCTACCCA CTGGCAGCCA GGGCGCAGAA GCGCTTTTCG ACGATTTCCT GGACCGCATG
CCGCACTATG CGGACACCCG CGACTTCCCC GCCGTTAAAG GTCCAAGTTA TCTGGGCGTG
CATTTGCGTT TTGGCACAAT TTCGATCAGG AAAATTACAT TGAACGCACT GGCGCAGCAG
CAAACGGGCA GCGAAGGCGC CGCAACCTGG CTCAGCGAAC TGATCTGGCG GGATTTTTAT
GCCCAGATCC TGGCGAACTT TCCGCATGCG GCCAGCAGCG CGTTCAAGCC CGGCTATGAC
GCGATTGCAT GGGAACAAGG CGAAAAAGCC GAGCTGCTTT TCCAGGCCTG GTGCGAGGGC
CGGACCGGCT ACCCGCTGGT CGATGCAGCC ATGGCCCAAC TCAACCAGAC CGGCTACATG
CATAACCGCC TGCGCATGGT GACAGCCAGC TTTCTGGTCA AGGATCTTGG GATCGACTGG
CGCTGGGGTG AGCGTTACTT TGCCGAAAAA CTCAATGATT TTGACCTGGC ATCGAACAAC
GGCGGCTGGC AGTGGGCCGC CAGCACGGGC TGCGATGCGC AGCCTTACTT CCGAATTTTC
AACCCCGTCA GCCAAAGCGA GAAGTTTGAC GCCGACGGAA AGTTCATCCG CAAGTACTTG
CCGGTACTGG CAAAACTGCC CAAGGCTGCC TTGCACAGTC CGTGGCTGGC TTCGCCGATG
GAAAGGGCTG CAGCAAGCGT GGCACTGGGC AGCAACTACG CAAGGCCTGT CGTAGCGCAT
GCCGAAGCGC GTGCGCTGAC CTTGCAGCGC TACGCCCTCG TGAAAAAGTC CTGA
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| Protein sequence | MWFRRDLRLQ DNAALHHALK SCEQVFCAFV FDRAILDSLP KADRRVEFIR ESLVDLNRQL
AKLALPAGLL IRHGTALDAL PALASRLSVD AVFANHDDEP CSLARDAEVQ GLLECAGVAF
HTFKDHVIFE RQEVLTLAGQ PYTVFTPYKK AWLKKVDAFY LQPYPVEKYA SALAARPADE
RQDVPALAEL GFEKTNLSAL RLPTGSQGAE ALFDDFLDRM PHYADTRDFP AVKGPSYLGV
HLRFGTISIR KITLNALAQQ QTGSEGAATW LSELIWRDFY AQILANFPHA ASSAFKPGYD
AIAWEQGEKA ELLFQAWCEG RTGYPLVDAA MAQLNQTGYM HNRLRMVTAS FLVKDLGIDW
RWGERYFAEK LNDFDLASNN GGWQWAASTG CDAQPYFRIF NPVSQSEKFD ADGKFIRKYL
PVLAKLPKAA LHSPWLASPM ERAAASVALG SNYARPVVAH AEARALTLQR YALVKKS
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